DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32486 and LOC108348051

DIOPT Version :9

Sequence 1:NP_647765.1 Gene:CG32486 / 38367 FlyBaseID:FBgn0266918 Length:412 Species:Drosophila melanogaster
Sequence 2:XP_002729874.1 Gene:LOC108348051 / 108348051 RGDID:11425062 Length:399 Species:Rattus norvegicus


Alignment Length:404 Identity:181/404 - (44%)
Similarity:259/404 - (64%) Gaps:27/404 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PLLGDNQAVATTSSASSASSSSTSSSSSSVGGGNVVGVPLDT---------QGSGEP--PAKKQL 73
            |..|...||...........::...:::::|.....|:|.:.         :.:|:|  |.||:|
  Rat    12 PAAGPAGAVPAGVGVGVGPGAAAGPAAAALGEAAGPGIPDEAGLAGARQLQEAAGDPDAPPKKRL 76

  Fly    74 LDGGGGGATSSSGSSLLSSAAAASGMHEKLAHRISNALCCAVCLDLPKTAMYQCQMGHLMCAACF 138
                   ..:.:..:..::.||.||   ||..|:.:.|||.|||||||.::|||..||||||.||
  Rat    77 -------RAAEAAEAAAAAVAAGSG---KLEERLYSVLCCTVCLDLPKASVYQCTNGHLMCAGCF 131

  Fly   139 THLLADGRLRDQIATCPNCRVEISKSTASRNLAVEKAASELPSECQFCNKEFPYKSLERHEQHEC 203
            .|||||.||:::.|||||||.|||||...||||||||.|||||||.||.::||...||||::.||
  Rat   132 IHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEEC 196

  Fly   204 QERPTKCKYHRIGCQWRGPYHETNEHERNCLHPQKSGYEVMAALEAHDDRIKEEKKMFNTLIDLL 268
            |:|.|:|||.||||.|.||:||...||..|.||.|:|.|:|..|:..|...::|.:::|::..||
  Rat   197 QDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLL 261

  Fly   269 SYEKIIFNDLQMKPYRTDEYVHKLFYETARFSAFNQQWVVKARINNSQRDPHQSNERTITYQLIL 333
            |:|||.:.::|.:|||||:::.:|:|||.||:..||.||:|||:|:|:|:|:.|.:||:::||:|
  Rat   262 SFEKIGYTEVQFRPYRTDDFITRLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQLLL 326

  Fly   334 KTKTSTPMSIHFFALKGPFSDMKVSTQIYKHEFTETSTESEYYVLPLPDGVGGSGSSECNRMLAN 398
            |:|.:.|:...|..||||:.|:::|..||...||..|.|::|..||:.|.|      |||::||.
  Rat   327 KSKVTAPLECSFLLLKGPYDDVRISPVIYHFVFTNESNETDYVPLPIIDSV------ECNKLLAA 385

  Fly   399 KGINFRLLMFLLNK 412
            |.||.||.:|.:.|
  Rat   386 KNINLRLFLFQIQK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32486NP_647765.1 zf-C3HC4_3 109..164 CDD:290631 38/54 (70%)
Sina 168..>232 CDD:302762 42/63 (67%)
LOC108348051XP_002729874.1 Sina 161..>222 CDD:302762 40/60 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1174688at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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