DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1271 and RPT2a

DIOPT Version :10

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_194633.1 Gene:RPT2a / 829025 AraportID:AT4G29040 Length:443 Species:Arabidopsis thaliana


Alignment Length:257 Identity:52/257 - (20%)
Similarity:79/257 - (30%) Gaps:113/257 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VGSALKYASTNAA-----LKKIKDAPEVSI----------------------SDLRSLLPASEDK 70
            :..||.:...||:     :|:.:|...:::                      |:|.|.:||..|.
plant   667 IAGALAFWMANASELLNFIKQDRDLNRITLDAQDVLAHLVQMAFKYLVHCLQSELTSSMPAFIDD 731

  Fly    71 SETNDNRKSNDQRIVVVRGVVKPKISGDEGYKNNNVLISPETG----------DKALIIQ----- 120
            .|.||::              :|||..         ::...||          :.||.||     
plant   732 PEENDSQ--------------RPKIED---------VLHTLTGAMSLLRRCRVNAALTIQLFSQL 773

  Fly   121 ----------RTQTYVYSG-----WKRLF-QSTGHRFMLERSLRKHGAD------FTRTVPFVIV 163
                      |..|...||     |..:. |...|   :|....|.|.:      .:|.|     
plant   774 FHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLAH---IEAWAEKQGLELAADCHLSRIV----- 830

  Fly   164 GKDQQSNSSFVAVNMDG-SRQPLPLTTVYNRLQPINSSFLQAFLY--------PDYPVGLLD 216
                   .:...:.||. |.|.:|  .:.|....:||..|||.|.        |..|..|:|
plant   831 -------QATTLLTMDKYSHQDIP--NINNTCFKLNSLQLQALLQNYHCAPDEPYIPTELID 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 ASKHA_NBD_FGGY_GK5-like 32..549 CDD:466803 52/257 (20%)
RPT2aNP_194633.1 PTZ00361 7..443 CDD:185575
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.