DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1271 and psmc5

DIOPT Version :9

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001003740.1 Gene:psmc5 / 445285 ZFINID:ZDB-GENE-030131-6547 Length:406 Species:Danio rerio


Alignment Length:194 Identity:42/194 - (21%)
Similarity:70/194 - (36%) Gaps:63/194 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PESLWRKIVG----------VITQAVKNAQLTPPDITCLTISTQRCTFLTWDHRSGE-------Y 123
            |:|.:..|.|          ||...||:.:|    ...|.|:..:...|.....:|:       .
Zfish   144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEL----FEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

  Fly   124 YHNFITWKDLRADELVDQWNASWTKSSMNWFSYALFLLTRQ----------------SRFLAGS- 171
            :|...|:..:...|||.::.....:....     ||::.|:                ||...|| 
Zfish   205 HHTDCTFIRVSGSELVQKFIGEGARMVRE-----LFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

  Fly   172 --------VLQLMNGQVTPRLLFEIMNNKKLKQALMQKKARVELLDSWILHKLRTGSSRDKDVE 227
                    :|:|:| |:..   ||...|.|:..|    ..|:::|||.:|...|.    |:.:|
Zfish   265 GDSEVQRTMLELLN-QLDG---FEATKNIKVIMA----TNRIDILDSALLRPGRI----DRKIE 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 GlpK 32..555 CDD:223628 42/194 (22%)
FGGY_GK5_metazoa 32..552 CDD:212665 42/194 (22%)
psmc5NP_001003740.1 RPT1 4..404 CDD:224143 42/194 (22%)
AAA_16 153..>206 CDD:289934 10/56 (18%)
AAA 186..318 CDD:278434 31/148 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.