DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1271 and Gykl1

DIOPT Version :9

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_599168.1 Gene:Gykl1 / 291468 RGDID:1305596 Length:549 Species:Rattus norvegicus


Alignment Length:552 Identity:153/552 - (27%)
Similarity:252/552 - (45%) Gaps:65/552 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DSPAFIL-----ALDVGTTCVRSFVLDEQ-----CEVRGSAVDAVELLN--PQPGYFEIEPESLW 80
            |:|..:|     |:|.||:..|..|.:.|     |.      ..||:..  |:.|:.|.:|:.:.
  Rat     3 DAPKAVLGPLVGAVDQGTSSTRFLVFNPQTAELLCH------HQVEIAQEFPREGWVEQDPKVIL 61

  Fly    81 RKIVGVITQAVKNAQLTPPDIT---CLTISTQRCTFLTWDHRSGEYYHNFITWKDLRADELVDQW 142
            :.:...|.:..:.......||:   .:.::.||.|.:.||..:||..:|.:.|.|||....|:..
  Rat    62 QSVYECIEKTCEKLGQQSIDISNIKAIGVTNQRETTIVWDKFTGEPLYNAVVWLDLRTQSTVENL 126

  Fly   143 NASWTKSSMNWFSYALFLLTRQSRFLAGSVLQLMNGQVTPRLLFEIMNNKKLKQALMQKKARVEL 207
            |.| ..:|.|:.           :...|..:......|  :|.:.|.|.|.:::|:...:|....
  Rat   127 NKS-ISASNNFI-----------KIKTGLPISTYFSAV--KLHWLIENVKNVQKAIEDGRAFFGT 177

  Fly   208 LDSWILHKLRTGSSRDKDVEHITDVTSSTATGLYDPFTLSWSPLISWLFGINSKILPRVVDN--- 269
            :|||::..:..|.:..   .|.|||::::.|.|::..:|.|...:...|||...||||:..:   
  Rat   178 VDSWLIWCMTGGINGG---VHCTDVSNASRTMLFNIHSLQWDEELCEFFGIPMTILPRIRSSSEI 239

  Fly   270 -GYKGFGHVHPTAFGPDWANTEIPIAASLSDQTAAIWGSQCFQKNDVKVTMGTGAFLNLVTGDRC 333
             |....|.:.           .:||:..|.||:||:.|..|.|....|.|.|||.||...||.:|
  Rat   240 YGLMKSGVLE-----------GVPISGCLGDQSAALVGQLCLQDGQAKSTYGTGCFLLCNTGQKC 293

  Fly   334 QAVISGMYPLVAWQFKKPTRQQGAVYCIEGASHDFGTVVTWAQ-SCELFDSPANTSDIAQSVPDT 397
            .....|:...||:   |..|::...|.:||:....|.||:|.: :.::..|.::...:|:....:
  Rat   294 VNSDHGLLTTVAY---KMGREEPVYYALEGSVAIAGAVVSWLKNNLQIIKSSSDIEKLAEKAGTS 355

  Fly   398 NDVFFMPAFSGLGPPVNDYRSASGFI-GLTPSTTKAHMVRALLESIVFRLVQLIEAAEKETSQKL 461
            ...:|:||||||..|..| .||.|.| |||..|.|.|:..|.||::.|:..::::|...:....|
  Rat   356 YGCYFVPAFSGLYAPYWD-PSARGIICGLTQFTNKFHIAFAALEAVCFQTREILDAMNSDCGIPL 419

  Fly   462 HMIRVDGGVSRNDFVCQFLADLSRLRVERADNAESSIMGATFMAGINLGI--WR-DVNDLKRFRK 523
            ..::||||::.|..:.|..||:..:.|.:....|::.:||...||...||  |. |..||...: 
  Rat   420 THLQVDGGMTANKILMQLQADILCIPVMKPFMPETTALGAAMAAGAAEGIRVWSLDPKDLTGVQ- 483

  Fly   524 VARVFEPRPKEYETIANRMDKWSRTIARFSDW 555
             ...|||:....|: ..|...|.|.:.:...|
  Rat   484 -MEKFEPQINVEES-EGRYSTWKRAVMKSMGW 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 GlpK 32..555 CDD:223628 150/546 (27%)
FGGY_GK5_metazoa 32..552 CDD:212665 150/543 (28%)
Gykl1NP_599168.1 glycerol_kin 11..513 CDD:273549 149/542 (27%)
FGGY_GK1-3_metazoa 11..513 CDD:212664 149/542 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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