DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1271 and Katnal1

DIOPT Version :10

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001006957.1 Gene:Katnal1 / 288449 RGDID:1359252 Length:488 Species:Rattus norvegicus


Alignment Length:174 Identity:38/174 - (21%)
Similarity:62/174 - (35%) Gaps:58/174 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 LFDSPANTSD--IAQSV-PDTNDVFFMPAFSGLGPPVNDYRSASGFIGLTPSTTKAHMVRALLES 441
            |...|..|..  :|::| .:....||..:.|.|   .:.||..|           ..:||.|.|.
  Rat   243 LMVGPPGTGKTMLAKAVATECGTTFFNVSSSTL---TSKYRGES-----------EKLVRLLFEM 293

  Fly   442 IVFRLVQLI-------------EAAEKETSQKLH---MIRVD--GGVSRNDFVCQFLADLSRLRV 488
            ..|.....|             .:.|.|.|:::.   :|::|  ||...||       |.|::.:
  Rat   294 ARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALEND-------DPSKMVM 351

  Fly   489 ERADNAESSIMGATFMAGINLGIWRDVNDLKRFRKVARVFEPRP 532
                     ::.||...      | |:::..|.|...|::.|.|
  Rat   352 ---------VLAATNFP------W-DIDEALRRRLEKRIYIPLP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 ASKHA_NBD_FGGY_GK5-like 32..549 CDD:466803 38/174 (22%)
Katnal1NP_001006957.1 Kp60-NTD 4..72 CDD:439297
SpoVK 52..452 CDD:440232 38/174 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..179
RecA-like_KTNA1 207..376 CDD:410930 36/169 (21%)
Vps4_C <448..486 CDD:462762
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.