Protein Alignment CG1271 and Psmc5

DIOPT Version :10

• Sequence 1: NP_647763.1
• Gene: CG1271 / 38364
• FlyBaseID: FBgn0035392
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_032976.1
• Gene: Psmc5 / 19184
• MGIID: 105047
• Length: 406
• Species: Mus musculus
• Alignment Length: 194
• Identity: 42/194 - (21%)
• Similarity: 70/194 - (36%)
• Gaps: 63/194 - (32%)

  Fly    76 PESLWRKIVG----------VITQAVKNAQLTPPDITCLTISTQRCTFLTWDHRSGE-------Y 123
            |:|.:..|.|          ||...||:.:|    ...|.|:..:...|.....:|:       .
Mouse   144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEL----FEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

  Fly   124 YHNFITWKDLRADELVDQWNASWTKSSMNWFSYALFLLTRQ----------------SRFLAGS- 171
            :|...|:..:...|||.::.....:....     ||::.|:                ||...||
Mouse   205 HHTDCTFIRVSGSELVQKFIGEGARMVRE-----LFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

  Fly   172 --------VLQLMNGQVTPRLLFEIMNNKKLKQALMQKKARVELLDSWILHKLRTGSSRDKDVE 227
                    :|:|:| |:..   ||...|.|:..|    ..|:::|||.:|...|.    |:.:|
Mouse   265 GDSEVQRTMLELLN-QLDG---FEATKNIKVIMA----TNRIDILDSALLRPGRI----DRKIE 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1271	NP_647763.1	ASKHA_NBD_FGGY_GK5-like	32..549	CDD:466803	42/194 (22%)
Psmc5	NP_032976.1	PRK03992	24..400	CDD:179699	42/194 (22%)
		May mediate interaction with PRPF9. /evidence=ECO:0000269|PubMed:17349974	186..406		31/148 (21%)