DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1271 and shpk-1

DIOPT Version :9

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001366916.1 Gene:shpk-1 / 188886 WormBaseID:WBGene00012017 Length:430 Species:Caenorhabditis elegans


Alignment Length:198 Identity:43/198 - (21%)
Similarity:71/198 - (35%) Gaps:71/198 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LALDVGTT----CVR---SFVLDEQCEVRGSAVDAVELLNPQ-------------PGYFE---IE 75
            :.:|:|||    |.|   :.:|:.:....|...||..|.||:             ....|   ::
 Worm     7 VGIDIGTTSAKICARNGENVILEFKKIYEGDNSDAAGLQNPKIIIQTVLDLLERTKSNLESRNLK 71

  Fly    76 PESLWR--KIVGVITQAVKNAQLTPPDITCLTI---------STQRCTFL----TWD-------- 117
            ..::|.  ::.|::....:..::   |:..|||         ||:...||    .|:        
 Worm    72 ISNIWTCGQMHGIVMWKQRQNEI---DLETLTISPLYNWTYSSTELPAFLKTIPKWECGDLHPGF 133

  Fly   118 ---------HRSGEYYHNFI---TWKDL-------RADELVDQWNA-SWTKSSMN--WFSYALFL 160
                     :.:.|:..|||   |..||       ..|.|:...|| ||...:.|  |.|..|..
 Worm   134 GLVTLAFLNYSNPEFLTNFIHCGTIMDLFISILTQNPDPLISHHNAHSWGYCTENATWQSEILDF 198

  Fly   161 LTR 163
            |.:
 Worm   199 LPK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 GlpK 32..555 CDD:223628 43/198 (22%)
FGGY_GK5_metazoa 32..552 CDD:212665 43/198 (22%)
shpk-1NP_001366916.1 FGGY_SHK_like 4..430 CDD:212661 43/198 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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