DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1271 and rpt-2

DIOPT Version :10

Sequence 1:NP_647763.1 Gene:CG1271 / 38364 FlyBaseID:FBgn0035392 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_504558.1 Gene:rpt-2 / 178988 WormBaseID:WBGene00004502 Length:443 Species:Caenorhabditis elegans


Alignment Length:247 Identity:44/247 - (17%)
Similarity:89/247 - (36%) Gaps:90/247 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ESGPPDSPAFILALDVGTTCVRSFVLDEQC-EVRGSAVDAVELLNPQPGYFE---IEP------- 76
            |..|.::.|     |||.       ||:|. |::    :||||....|.|:|   |.|       
 Worm   180 EKAPQETYA-----DVGG-------LDQQIQEIK----EAVELPLTHPEYYEEMGIRPPKGVILY 228

  Fly    77 ------------------ESLWRKIVG-------------VITQAVKNAQLTPPDITCL----TI 106
                              .:.:.:|||             ::.:..:.|:...|.|..:    .:
 Worm   229 GCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAV 293

  Fly   107 STQRCTFLTWDHRSG---EYYHNFITWKDLRADELVDQWNASWTKSSMNWFSYALFLLTRQSRFL 168
            .|:|     :|..||   |.....:        ||::|.:...::..:.     :.:.|.:...|
 Worm   294 GTKR-----YDSNSGGEREIQRTML--------ELLNQLDGFDSRGDVK-----VLMATNRIESL 340

  Fly   169 AGSVLQLMNGQVTPRLLFEIMNNKKLKQALMQKKARVEL-----LDSWILHK 215
            ..::::  .|::..::.|.:.:.|..::......:|:.|     |:.:|..|
 Worm   341 DPALIR--PGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAK 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1271NP_647763.1 ASKHA_NBD_FGGY_GK5-like 32..549 CDD:466803 41/238 (17%)
rpt-2NP_504558.1 PTZ00361 1..443 CDD:185575 44/247 (18%)

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