DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scramb2 and Plscr3

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001161969.1 Gene:Plscr3 / 70310 MGIID:1917560 Length:296 Species:Mus musculus


Alignment Length:257 Identity:105/257 - (40%)
Similarity:149/257 - (57%) Gaps:13/257 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPQNAPQDENG-AVVLQPQAANVGNNANGPENWMSIP-VGMPNCPQGLEYLTALDQLLVSQKIEK 72
            :|...|....| |:...|     |..|.||    ..| |.:|..|.|||:|..:||:|:.||.|:
Mouse    39 VPTQVPAPAPGFALFPSP-----GPVAPGP----PAPFVPLPGVPPGLEFLVQIDQILIHQKAER 94

  Fly    73 LELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYRPFKC 137
            :|...|:||.|.:::::..||.:..|.|||:||.|...|..|||.:::.|....|||.|.||..|
Mouse    95 VETFLGWETCNMYELRSGTGQQLGQAAEESNCCARLCCGARRPFRIRLADPGDREVLRLLRPLHC 159

  Fly   138 DILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCKCFSDTNF 202
            ...|| |..:..:||.||||..||.|.|......|||:|.:.....||::.||...|.|.:||||
Mouse   160 GCSCC-PCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSILDADRQPVLRVVGPCWTCGCGTDTNF 223

  Fly   203 KVLSAN-NEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYEQ 263
            :|.:.: :..:|:|||||.||.||..||||.|.:.||::|||::||::..|.||||.:::|:
Mouse   224 EVKTKDESRSVGRISKQWGGLLREALTDADDFGLQFPVDLDVKVKAVLLGATFLIDYMFFEK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 95/222 (43%)
Plscr3NP_001161969.1 Proline-rich domain (PRD). /evidence=ECO:0000250|UniProtKB:O15162 1..58 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 1/5 (20%)
SH3-binding 1. /evidence=ECO:0000255 7..15
PPxY motif. /evidence=ECO:0000255 15..18
SH3-binding 2. /evidence=ECO:0000255 21..27
SH3-binding 3. /evidence=ECO:0000255 66..71 2/4 (50%)
Scramblase 69..285 CDD:252175 93/216 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0621
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23219
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.880

Return to query results.
Submit another query.