DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and si:ch211-71m22.5

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_693207.5 Gene:si:ch211-71m22.5 / 564785 ZFINID:ZDB-GENE-130531-65 Length:277 Species:Danio rerio


Alignment Length:266 Identity:123/266 - (46%)
Similarity:157/266 - (59%) Gaps:21/266 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NAPQDENGAVVLQPQAANVGNNANGPENWMSIPVG---------MP------NCPQGLEYLTALD 62
            |||    |..|..|....:|:.....|.:.:.|.|         ||      .||.||||||.:|
Zfish    11 NAP----GVNVPMPPVYTIGHPPGVNEVYTTPPTGYVAPQVPAVMPVLDRPMGCPVGLEYLTQVD 71

  Fly    63 QLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNE 127
            ||||.||:|.:|:|.|:||.|::.|||||||.|:||.|||..|:|...|..|.|.:.|.||...|
Zfish    72 QLLVHQKVELMEVLMGWETNNQYVVKNSLGQQVFFAAEESHFCSRMFCGSVRSFLLHIQDNMGQE 136

  Fly   128 VLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVC 192
            |:.|.||.||. .|.||.|:..:||.:|.|..:|.|.|......|||.|.|...:.||:|.||.|
Zfish   137 VMTLSRPLKCS-SCFFPCCLQELEVHSPSGSPLGYVTQSWHPYLPKFIIHNERKEPVLKILGPFC 200

  Fly   193 PCKCFSDTNFKVLSANNEE-IGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLI 256
            .|||.||.||:|:|.:... ||:|||||||...|.|||||.|.:.||::|||::||:|..|.|||
Zfish   201 DCKCCSDVNFEVMSLDESSVIGRISKQWSGFEAEAFTDADNFGLQFPMDLDVKIKAVILGACFLI 265

  Fly   257 DAVYYE 262
            |.:::|
Zfish   266 DFMFFE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 115/237 (49%)
si:ch211-71m22.5XP_693207.5 Scramblase 51..271 CDD:252175 112/220 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100156
Panther 1 1.100 - - O PTHR23248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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