DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and Plscr5

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001178928.1 Gene:Plscr5 / 501036 RGDID:1564500 Length:274 Species:Rattus norvegicus


Alignment Length:260 Identity:96/260 - (36%)
Similarity:151/260 - (58%) Gaps:16/260 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPQNAPQDENGAVVLQPQAANVGN------NANGPENWMSIPVGMPNCPQGLEYLTALDQLLVSQ 68
            ||:....|:|.    |..::|.|.      :.:.|.:::...:    .|.|||||:.||.:::.|
  Rat    18 LPRATNPDQNS----QEASSNPGKQTRQQPHVSQPSSFLPTAI----LPPGLEYLSQLDLIIIHQ 74

  Fly    69 KIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYR 133
            ::|.|.::.|.||.|::::|||.||.:|||.|||.|..||:....|...::|.||...||:.:.|
  Rat    75 QVELLGMILGTETSNKYEIKNSSGQRIYFAVEESICFNRNVCSTLRACTLRITDNSGREVITVNR 139

  Fly   134 PFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCKCFS 198
            |.:|:...| |..:..:|:.||||.::|.|.|.....:|||.|:|...:.:|:|.||...|.||.
  Rat   140 PLRCNSCWC-PCYLQELEIQAPPGTIVGFVAQKWDPFQPKFTIQNANKEDILKIVGPCTTCGCFG 203

  Fly   199 DTNFKVLSANNE-EIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYE 262
            |.:|:|.:.:.: .||||||.|||...::||:||.|.:..|.:|||.:||.:..|.||.|.:::|
  Rat   204 DVDFEVKTVDEKVTIGKISKYWSGFVNDVFTNADNFGIHVPEDLDVTLKAAMIGACFLFDFMFFE 268

  Fly   263  262
              Rat   269  268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 88/222 (40%)
Plscr5NP_001178928.1 Scramblase 48..268 CDD:252175 88/224 (39%)

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