DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and CG9084

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001260884.1 Gene:CG9084 / 36172 FlyBaseID:FBgn0033582 Length:281 Species:Drosophila melanogaster


Alignment Length:283 Identity:82/283 - (28%)
Similarity:131/283 - (46%) Gaps:43/283 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEYKVLPQ---NAPQ--DENGAVVLQPQAANVGNNANGPENWMSIPVGMPNCPQGLEYLTALDQL 64
            ||.:|..|   :.|:  |.:.::..||:       ...|...:.:|:......:.|..|:..|.|
  Fly    14 SEIRVAQQPSLSEPRVYDSHISITSQPR-------PEAPRIPLPVPIATVTGSRTLIPLSGYDCL 71

  Fly    65 --LVSQKIEK-LEL---------LTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFE 117
              |.|..||: .||         |||..::||:.|::.||..::.|.|.|....|.:.|..|||:
  Fly    72 ADLPSVHIEQTFELNDVRLPFAALTGVSSENRYVVRSPLGDAIFAANESSTEKNRLLWGAGRPFQ 136

  Fly   118 MKILDNFQNEVLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKN-TCG 181
            |.:||....|.|...:......:||   ...::|:..|||.::|.|.|..|||:|:|.|:: :.|
  Fly   137 MHLLDKTHQEALVFRKKLAMGSMCC---QAKSLEIWIPPGNLLGKVVQSPTFMQPEFFIEDESTG 198

  Fly   182 DTVLQIEGPV----CPCKCFS---DTNFKVLSANNEEIGKISKQWSGLGRELFTDADYFSVTFPL 239
            .....:||||    |   |||   |..||:.|..|.. ..|..:|.. .:..:|...|||   ..
  Fly   199 QLTFCVEGPVGLGFC---CFSLPKDCYFKIHSGGNMR-ASIDHKWLA-SKSQYTTNIYFS---DA 255

  Fly   240 NLDVRMKALIFAALFLIDAVYYE 262
            .|..:.:|||..:.||::.::::
  Fly   256 KLTAKERALILGSAFLLEYLFFQ 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 73/241 (30%)
CG9084NP_001260884.1 LOR 66..277 CDD:295149 70/221 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I3943
eggNOG 1 0.900 - - E1_KOG0621
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 56 1.000 Inparanoid score I1798
Isobase 1 0.950 - 0 Normalized mean entropy S1940
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.920

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