DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and Plscr3

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001012139.1 Gene:Plscr3 / 360549 RGDID:1307016 Length:296 Species:Rattus norvegicus


Alignment Length:259 Identity:106/259 - (40%)
Similarity:147/259 - (56%) Gaps:13/259 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PQNAPQDENG-----AVVLQPQAANVGNNANGPENWMSIPVGMPNCPQGLEYLTALDQLLVSQKI 70
            |..||....|     ...|.|....|.....||.      |.:|..|.|||:|..:||:|:.||.
  Rat    34 PGQAPVPTQGPAPAPGFSLFPSPGPVVPGPPGPF------VPLPGVPSGLEFLVQIDQILIHQKA 92

  Fly    71 EKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYRPF 135
            |::|...|:||.||:::::..||.:..|.|||:||.|...|..||..:::.|....|||.|.||.
  Rat    93 ERVETFLGWETCNRYELRSGTGQQLGQAAEESNCCARLCCGARRPLRIRLADPGDREVLRLLRPL 157

  Fly   136 KCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCKCFSDT 200
            .|...|| |..:..:||.||||..||.|.|......|||:|.:.....||::.||.|.|.|.:||
  Rat   158 HCGCSCC-PCGLQEMEVQAPPGTTIGHVLQTWHPFIPKFSILDADRQPVLRVVGPCCTCGCGTDT 221

  Fly   201 NFKVLSAN-NEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYEQ 263
            ||:|.:.: :..:|:|||||.||.||..||||.|.:.||::||||:||::..|.||||.:::|:
  Rat   222 NFEVKTKDESRSVGRISKQWGGLLREALTDADDFGLQFPVDLDVRVKAVLLGATFLIDYMFFEK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 96/221 (43%)
Plscr3NP_001012139.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 6/23 (26%)
Proline-rich domain (PRD). /evidence=ECO:0000250|UniProtKB:O15162 1..58 6/23 (26%)
SH3-binding 1. /evidence=ECO:0000255 7..15
PPxY motif. /evidence=ECO:0000255 15..18
SH3-binding 2. /evidence=ECO:0000255 21..27
SH3-binding 3. /evidence=ECO:0000255 66..71 2/10 (20%)
Scramblase 73..285 CDD:252175 94/212 (44%)
Blue background indicates that the domain is not in the aligned region.

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