DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and Plscr2

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_063121641.1 Gene:Plscr2 / 315883 RGDID:1359107 Length:313 Species:Rattus norvegicus


Alignment Length:284 Identity:123/284 - (43%)
Similarity:167/284 - (58%) Gaps:33/284 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PQNAPQDENGAVVLQ-----PQAANVGN------NANGPEN--------------------WMSI 44
            |.:.|.:..|...||     ||:...|.      :..|.|:                    ||..
  Rat    28 PVSGPPEHTGHPALQTNYQGPQSGYPGPQTGYTVSTTGHESYAAARLPTQNNQTIVLINTQWMPA 92

  Fly    45 PVGMPNCPQGLEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNM 109
            |..:.|||.|||||..:||:|:.|::|.||:||||||.|:|::||||||.||.|.|::||||||.
  Rat    93 PPPLLNCPPGLEYLNQIDQILIHQQVELLEVLTGFETNNKFEIKNSLGQMVYVAVEDTDCCTRNC 157

  Fly   110 LGRSRPFEMKILDNFQNEVLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKF 174
            ...||||.::|||:...||:.|.||.:|. .||||.|:..:|:.||||..||.|.|......||.
  Rat   158 CEASRPFTLRILDHLGQEVMTLERPLRCS-SCCFPCCLQEIEIQAPPGVPIGYVTQNWHPCLPKL 221

  Fly   175 NIKNTCGDTVLQIEGPVCPCKCFSDTNFKVLSANN-EEIGKISKQWSGLGRELFTDADYFSVTFP 238
            .::|...:.||::.||...|.|.||.:|::.|.:. ..||||:|||||..:|.|||||.|.:.||
  Rat   222 TLQNDKKEDVLKVVGPCVACTCCSDIDFEIKSLDEVSRIGKITKQWSGCVKEAFTDADNFGIQFP 286

  Fly   239 LNLDVRMKALIFAALFLIDAVYYE 262
            |:|||:|||::..|.||||.:::|
  Rat   287 LDLDVKMKAVMLGACFLIDYMFFE 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 112/222 (50%)
Plscr2XP_063121641.1 None

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