DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and scrm-6

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_492890.2 Gene:scrm-6 / 185826 WormBaseID:WBGene00009753 Length:292 Species:Caenorhabditis elegans


Alignment Length:212 Identity:67/212 - (31%)
Similarity:106/212 - (50%) Gaps:18/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMK 119
            |:.|.....|::.|.:|.||:.||.||.||:.|.:...:.:.:..|.|....|...|..|.|.|:
 Worm    77 LDVLAQTTSLMIVQCLEPLEIFTGIETPNRYVVHDMYCRPLLYCMERSSFFARQHQGSQRNFAMQ 141

  Fly   120 ILDNFQNEVLHLY--RPFKCDILCCFPSCMN--AVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTC 180
            .:|.|...|::.:  ||      ||  ||.:  |.|..   ||.||.:::.|  ....|::..|.
 Worm   142 CMDIFGAPVMNCFRSRP------CC--SCDDFLATEFL---GQRIGMMKREC--CDDNFHLVGTG 193

  Fly   181 GDTVLQIEGPVCPCKCFSDTNFKVLSANNEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRM 245
            .:..|.:..|.|.| |.....|.|::.|..:||:|.:.:.|..:|.:||||.:.|.||.:|...:
 Worm   194 SNEPLLVRSPGCAC-CGGTQVFPVMTYNGAKIGEIVRLYPGFMQEWYTDADTYIVHFPPDLPPIL 257

  Fly   246 KALIFAALFLIDAVYYE 262
            |.|:.::.||||..::|
 Worm   258 KILLISSTFLIDYTFFE 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 67/212 (32%)
scrm-6NP_492890.2 LOR 65..275 CDD:295149 67/212 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165971
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0621
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28609
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.760

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