DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and scramb1

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_061501795.1 Gene:scramb1 / 1276186 VectorBaseID:AGAMI1_006075 Length:340 Species:Anopheles gambiae


Alignment Length:258 Identity:138/258 - (53%)
Similarity:175/258 - (67%) Gaps:9/258 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 APQDENGAVVLQPQAANVGNNANGPE--------NWMSIPVGMPNCPQGLEYLTALDQLLVSQKI 70
            ||....|....||.....|...:.|.        .||.||.|:||||.|||||||:|||||.||:
Mosquito    72 APNQPYGGGGYQPVMVQPGMPGHPPPVMGQPVPGGWMPIPQGIPNCPPGLEYLTAIDQLLVHQKV 136

  Fly    71 EKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYRPF 135
            |.||..|||||.|::.|||:|||.||:|.|::.||.|...|.:|.|:|||||.:||||||..||.
Mosquito   137 ELLEAFTGFETANKYTVKNTLGQKVYWAMEDTGCCNRMCCGAARAFDMKILDTYQNEVLHFNRPL 201

  Fly   136 KCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCKCFSDT 200
            :|. .|.||.|:..:||:||||.|||.|||..:.:.|:|:|||..|:|||:|.||.|......|.
Mosquito   202 RCS-SCWFPCCLQTMEVTAPPGNVIGYVEQDWSILTPQFSIKNQNGETVLKISGPFCTFSICGDV 265

  Fly   201 NFKVLSANNEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYEQ 263
            .|:|||.|..::|||||||||||||:|||||:|.:.||::||||:||.:..||||||.:::|:
Mosquito   266 EFEVLSTNGTQVGKISKQWSGLGREMFTDADHFGINFPMDLDVRVKATLLGALFLIDYMFFEK 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 129/220 (59%)
scramb1XP_061501795.1 None

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