DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and LOC100536708

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_003197974.2 Gene:LOC100536708 / 100536708 -ID:- Length:273 Species:Danio rerio


Alignment Length:262 Identity:62/262 - (23%)
Similarity:115/262 - (43%) Gaps:28/262 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KVLPQNAPQDENGAVVLQPQAANVGNNANGPENWMSIPVGMPNCPQGLEYLTALDQLLVSQKIEK 72
            ::.|....||.  .:|||.:     .:..||.|..::       .:.|..||||      :.:.:
Zfish    31 QIRPAGDTQDL--TLVLQDR-----GDHEGPANTHTV-------SKTLGKLTAL------RTVTR 75

  Fly    73 LELLTGFE-------TKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLH 130
            |.:....|       .:..:.:.:.....::.|.|||.|......|.:|...::..|.....|..
Zfish    76 LHITARPELQGPQCVARRTYSICSENRDQLFVAVEESSCMCMQCCGPARSCSLRGFDKDSECVFL 140

  Fly   131 LYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCK 195
            ..||.:.| :||...|:..:.......::||:|.|..:...|...:.::.|.:.::|:|..|..:
Zfish   141 FERPLRAD-MCCLGCCLMEIRAYTAEREIIGTVHQRWSMFTPYLEVCDSEGISAMRIQGSCCNTR 204

  Fly   196 CFSDTNFKVLSANNEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVY 260
            |.|:...:|:|...|.||:|.|:|.|...:...|.:||.:..|..:.:..|.|:.||.||::.::
Zfish   205 CLSEQELQVVSTIGESIGRIWKKWPGYNDKCNMDHEYFGLDVPQEMSLNTKVLLLAAAFLLNHMF 269

  Fly   261 YE 262
            :|
Zfish   270 FE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 53/228 (23%)
LOC100536708XP_003197974.2 None

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