DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and si:dkey-62k3.6

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_073764539.1 Gene:si:dkey-62k3.6 / 100535492 ZFINID:ZDB-GENE-160728-111 Length:473 Species:Danio rerio


Alignment Length:270 Identity:95/270 - (35%)
Similarity:149/270 - (55%) Gaps:24/270 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LPQ--NAPQDENGAVVLQ----PQAANVGN--NANGPENWMSIPV-GMP------NCPQGLEYLT 59
            |||  :.|...:.|.:.|    |.|..:.|  :.|.|....:.|. .:|      ..|.||||||
Zfish   199 LPQGKSPPSTSSDAELQQQNQPPPAQLITNQCDPNNPAQVQAYPAPAVPPVILTYGIPPGLEYLT 263

  Fly    60 ALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNF 124
            .:||:||.|||:.:::||.::..|::::|||:||.||...|||||..|::||....|:::|.::.
Zfish   264 QVDQVLVRQKIQCIKILTCYQPSNQYEIKNSIGQEVYRVKEESDCFARSVLGSIHNFKLRIENSL 328

  Fly   125 QNEVLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEG 189
            ..||:.:.:|.:|        .:..:.:.||||..||.|:|..:|:.|||::.....:..|.|.|
Zfish   329 GQEVIQMEKPMQC--------YLQEIAIQAPPGITIGYVKQDWSFLNPKFSVIGPNNEVQLAIHG 385

  Fly   190 PVCPCKCFSDTNFKVLS-ANNEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAAL 253
            |..|..|.|:..|:|.| ...:.||:|.|:.|......|.|...|.:.|||:|||::||::..|.
Zfish   386 PFLPFDCCSEVIFEVKSLLYGQTIGRIIKEQSSFISTFFADNSNFRIEFPLDLDVKIKAVLLGAC 450

  Fly   254 FLIDAVYYEQ 263
            ||||.::|.:
Zfish   451 FLIDTIFYNK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 84/228 (37%)
si:dkey-62k3.6XP_073764539.1 None

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