DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scramb2 and plscr5

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_017949572.1 Gene:plscr5 / 100494447 XenbaseID:XB-GENE-6045015 Length:225 Species:Xenopus tropicalis


Alignment Length:213 Identity:87/213 - (40%)
Similarity:130/213 - (61%) Gaps:2/213 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQGLEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPF 116
            |.|||:|:.:.|:::.|:.|.|.:..|.|..|::::|::.||..|||.||::...:|..|..|||
 Frog     9 PPGLEHLSKMQQIIIHQQTELLGVFLGTEKSNKYEIKDNFGQRFYFATEENEYFNKNFCGPVRPF 73

  Fly   117 EMKILDNFQNEVLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCG 181
            .|:|.::...||:.:.||.:| |.||||..:..:||.||.|...|.:.|....:.|||.|:|...
 Frog    74 TMRISNSRGQEVITIIRPLRC-IHCCFPCYLQELEVQAPLGTTAGFIVQKWDPLLPKFIIQNESK 137

  Fly   182 DTVLQIEGPVCPCKCFSDTNFKVLSANNEE-IGKISKQWSGLGRELFTDADYFSVTFPLNLDVRM 245
            :.||.:.||.....||.|..|:|.:.|.|. ||||.|.|||...::||:||.|.:.||::|||::
 Frog   138 EDVLIVIGPYLTSSCFGDVIFEVKTLNEESTIGKICKYWSGFVNDVFTNADNFGIEFPVDLDVKL 202

  Fly   246 KALIFAALFLIDAVYYEQ 263
            ||.:....||||.:|:||
 Frog   203 KAALIGTCFLIDLMYFEQ 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 85/211 (40%)
plscr5XP_017949572.1 LOR 8..220 CDD:470445 85/211 (40%)

Return to query results.
Submit another query.