DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and plscr5

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_017949572.1 Gene:plscr5 / 100494447 XenbaseID:XB-GENE-6045015 Length:225 Species:Xenopus tropicalis


Alignment Length:213 Identity:87/213 - (40%)
Similarity:130/213 - (61%) Gaps:2/213 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQGLEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPF 116
            |.|||:|:.:.|:::.|:.|.|.:..|.|..|::::|::.||..|||.||::...:|..|..|||
 Frog     9 PPGLEHLSKMQQIIIHQQTELLGVFLGTEKSNKYEIKDNFGQRFYFATEENEYFNKNFCGPVRPF 73

  Fly   117 EMKILDNFQNEVLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCG 181
            .|:|.::...||:.:.||.:| |.||||..:..:||.||.|...|.:.|....:.|||.|:|...
 Frog    74 TMRISNSRGQEVITIIRPLRC-IHCCFPCYLQELEVQAPLGTTAGFIVQKWDPLLPKFIIQNESK 137

  Fly   182 DTVLQIEGPVCPCKCFSDTNFKVLSANNEE-IGKISKQWSGLGRELFTDADYFSVTFPLNLDVRM 245
            :.||.:.||.....||.|..|:|.:.|.|. ||||.|.|||...::||:||.|.:.||::|||::
 Frog   138 EDVLIVIGPYLTSSCFGDVIFEVKTLNEESTIGKICKYWSGFVNDVFTNADNFGIEFPVDLDVKL 202

  Fly   246 KALIFAALFLIDAVYYEQ 263
            ||.:....||||.:|:||
 Frog   203 KAALIGTCFLIDLMYFEQ 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 85/211 (40%)
plscr5XP_017949572.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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