DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scramb2 and plscr4

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_002942920.2 Gene:plscr4 / 100488434 XenbaseID:XB-GENE-6449820 Length:205 Species:Xenopus tropicalis


Alignment Length:217 Identity:58/217 - (26%)
Similarity:102/217 - (47%) Gaps:21/217 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GMPNCPQGLEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLG 111
            |.|..|.|||.|..:|::.:.|...     :.|:....:.:....|..:|.|.|..:||      
 Frog     3 GTPVIPPGLENLLQMDEIWIKQTRH-----STFQNHCTYDLLTPSGALLYRAEETRECC------ 56

  Fly   112 RSRPFEMKILDNFQNEVLHLYRPFKCDILCCFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNI 176
             ...|::.:.:....:||.|..|   ...|.:.:   .::|.:..|.::|.:.:  |:....|.|
 Frog    57 -GPRFDVSVQNLHGQQVLSLLLP---SSYCTWET---QLQVFSGTGTLLGYINK--TWASMNFTI 112

  Fly   177 KNTCGDTVLQIEGPVCPCKCFSDTNFKV-LSANNEEIGKISKQWSGLGRELFTDADYFSVTFPLN 240
            .....:..|:::||.......||.||:| :..::...|.|::.|.|:.:|.|:..||:::.||.:
 Frog   113 LTPTREKSLEVQGPGWGGGFMSDVNFQVTMYGSHAAFGLITRVWRGVKKEFFSPNDYYAIKFPRD 177

  Fly   241 LDVRMKALIFAALFLIDAVYYE 262
            |||.:|||:.|....||..|||
 Frog   178 LDVNVKALLVACTIYIDFTYYE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 58/217 (27%)
plscr4XP_002942920.2 LOR 8..199 CDD:413170 54/210 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.