DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scramb2 and si:ch211-71m22.1

DIOPT Version :10

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001121867.1 Gene:si:ch211-71m22.1 / 100149582 ZFINID:ZDB-GENE-070705-193 Length:263 Species:Danio rerio


Alignment Length:252 Identity:119/252 - (47%)
Similarity:159/252 - (63%) Gaps:12/252 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VVLQPQ------AANVGNNA----NGPENWMSIPVGMPNCPQGLEYLTALDQLLVSQKIEKLELL 76
            |.|||.      |...|..|    :|....|.:|.....||.||||||.:|||||.||:|..|::
Zfish    10 VELQPNKNAIHPAPGYGQGAAIPGHGQVVMMPVPQRPDGCPPGLEYLTQIDQLLVQQKVELAEVI 74

  Fly    77 TGFETKNRFKVKNSLGQNVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYRPFKCDILC 141
            .|:||.|::.||||:||.|::..||:|||.|...|..|.|.:.:.||...||:.|.||.||....
Zfish    75 LGWETNNKYIVKNSMGQQVFYVAEENDCCNRQFCGPLRSFVIHVQDNLGQEVMRLMRPLKCGSCF 139

  Fly   142 CFPSCMNAVEVSAPPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCKCFSDTNFKVLS 206
            | |.|:..:|:.:|||..||.|.|......|||.|:|...:.||:||||.|.|:|.||.||.|||
Zfish   140 C-PCCLQELEIQSPPGYPIGYVIQNWHPFLPKFTIQNEKKEAVLKIEGPFCSCRCCSDVNFDVLS 203

  Fly   207 AN-NEEIGKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYE 262
            .: :.::|||||||:||.||.|||||.|.::||::|||::||::|.|.||||.:::|
Zfish   204 LDESTKVGKISKQWTGLVREAFTDADNFGISFPMDLDVKIKAVLFGACFLIDFMFFE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 111/222 (50%)
si:ch211-71m22.1NP_001121867.1 Scramblase 40..260 CDD:252175 110/220 (50%)

Return to query results.
Submit another query.