DRSC/TRiP Functional Genomics Resources

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Protein Alignment scramb2 and si:ch211-71m22.3

DIOPT Version :9

Sequence 1:NP_647761.1 Gene:scramb2 / 38362 FlyBaseID:FBgn0035390 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_017212921.1 Gene:si:ch211-71m22.3 / 100148868 ZFINID:ZDB-GENE-070705-195 Length:233 Species:Danio rerio


Alignment Length:241 Identity:73/241 - (30%)
Similarity:105/241 - (43%) Gaps:29/241 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PENWMS-----IPVGMPN---CPQGLEYLTALDQLLV-SQKIEKLELLTGFETKNRFKVKNSLGQ 93
            ||..:|     ..:..||   .|..||.||.:::|.| ....|.:|:....:....:.||:..|.
Zfish     3 PETCLSPLEVTAMLSSPNPYHYPSQLEGLTRIERLFVFRDHPECIEVCCEVQPNRSYSVKDDSGN 67

  Fly    94 NVYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYRPFKCDILCCFPSC-MNAVEVSAPPG 157
            .|:...|..|||....  ..|.|.|.:.||...||:.|..|..|      ..| .:.:||.:|||
Zfish    68 KVFSVTEADDCCGSQY--AERFFVMNVTDNLNREVIRLVHPSVC------TRCSSHELEVQSPPG 124

  Fly   158 QVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCKCFSDTNFKVLSAN----NEEIGKI--S 216
            ..||.|.|....:.|||.::|..|:...:|.||.....|.:|.||:::..|    ....|:|  .
Zfish   125 TPIGYVRQNWHILLPKFTVENERGEPEFKIMGPSVFWTCCTDVNFELVPLNAAAVERSFGRIINP 189

  Fly   217 KQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYE 262
            ..|:|.     .....|.:.||.:|.|:|||.:..|..||..:|||
Zfish   190 SYWAGP-----NPGANFVLEFPSSLQVKMKATVLGACILIHNMYYE 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scramb2NP_647761.1 Scramblase 42..263 CDD:252175 71/237 (30%)
si:ch211-71m22.3XP_017212921.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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