DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2162 and R3HCC1

DIOPT Version :9

Sequence 1:NP_001163332.2 Gene:CG2162 / 38360 FlyBaseID:FBgn0035388 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001129580.2 Gene:R3HCC1 / 203069 HGNCID:27329 Length:440 Species:Homo sapiens


Alignment Length:649 Identity:146/649 - (22%)
Similarity:242/649 - (37%) Gaps:235/649 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DQEFVHNVGCDIELF-VKKRLNRGVLLFPPVGNYRRYLIHQTCEKYRQQYDLF-TFSVGQGPQRR 64
            :.:|||.:..:::.| ::|:|:: ||||||:.:..|||||:|.|    .:||. :||||:|.:||
Human    15 ENDFVHRIQEELDRFLLQKQLSK-VLLFPPLSSRLRYLIHRTAE----NFDLLSSFSVGEGWKRR 74

  Fly    65 TVLCFRNQLLDPSGFENRKQQQQREKDREREAARSWRSNNNSHYHTNGRSSSASRRSATELCKMG 129
            ||:|                                        |.:.|..|:...|        
Human    75 TVIC----------------------------------------HQDIRVPSSDGLS-------- 91

  Fly   130 VKKHISETPLSKSNSVDLYRPPALRNNSNNNNSSSEEAAAVNEAITTPLAAGTATTASTSPTSKE 194
                                                               |.....::.|:...
Human    92 ---------------------------------------------------GPCRAPASCPSRYH 105

  Fly   195 SPNREADASAAAAAAATR-----RERRPDRAVYVPRARRSQTTPPTTTTTTTAAAATAVATTSPP 254
            .|...::..|||.....|     |.|:||:.:||||..|.|.....|:|:.....|.        
Human   106 GPRPISNQGAAAVPRGARAGRWYRGRKPDQPLYVPRVLRRQEEWGLTSTSVLKREAP-------- 162

  Fly   255 AAAAVVAATITTAPDSPPVADTQPSKADDVNGQPPSKSKKSKSHRERRERAKKTTTATTADNATV 319
                               |...|.:..||....|:..:                      ...|
Human   163 -------------------AGRDPEEPGDVGAGDPNSDQ----------------------GLPV 186

  Fly   320 LVISASENDTQSNEEHRPAKPADCDKEIMSGAQRTKPGNGNKSASNGKSQASPPLRIEDVVAARS 384
            |:       ||..|:             :.|     ||.        :.:..|.|   |.|    
Human   187 LM-------TQGTED-------------LKG-----PGQ--------RCENEPLL---DPV---- 211

  Fly   385 TNGEEPAKCDNDVRELQRASKEINRSNRRIMKQTFNSDVLEIPEKIETSATKAIPTSPQASATAK 449
              |.||...::                     |:...|::|:..:.  .:|..:.......:..:
Human   212 --GPEPLGPES---------------------QSGKGDMVEMATRF--GSTLQLDLEKGKESLLE 251

  Fly   450 PPVDSTTEDDDEEDEDDWEKMFDESGDCLDPKLLQELTESVGKCKIELPKMDYTVFHIKQQLLNE 514
            ..:.:..|:|:||.|:|......|..   ..:||||:|:::.|.:|::.|:........::|..|
Human   252 KRLVAEEEEDEEEVEEDGPSSCSEDD---YSELLQEITDNLTKKEIQIEKIHLDTSSFVEELPGE 313

  Fly   515 EEFPHVLEVSNFPVEFKTPDLLMLFAQYRGSGFDIKWVDDTHALAVFSSSRIAAEVLTMGHPFVK 579
            ::..||:|:.:|....||.|||..|::::..||.|:||||||||.:|.....|||.||.....:|
Human   314 KDLAHVVEIYDFEPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASAAEALTREFSVLK 378

  Fly   580 LKPLAEATLESRLKAKKAGAVSMQPYRQRPETCTALARRLVSGALGVKLPTAPQERENERRVLR 643
            ::||.:.|.:|:|||.:...: ::..::||:|...:|||||:.|||:      |.::.||..:|
Human   379 IRPLTQGTKQSKLKALQRPKL-LRLVKERPQTNATVARRLVARALGL------QHKKKERPAVR 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2162NP_001163332.2 R3H 6..70 CDD:294210 30/65 (46%)
RRM_SF 519..583 CDD:302621 28/63 (44%)
R3HCC1NP_001129580.2 R3H_unknown_1 19..80 CDD:100067 30/105 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..225 23/182 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..276 6/21 (29%)
RRM_SF 318..382 CDD:302621 28/63 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146973
Domainoid 1 1.000 150 1.000 Domainoid score I4402
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 207 1.000 Inparanoid score I3709
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D363445at33208
OrthoFinder 1 1.000 - - FOG0002567
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21678
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
77.000

Return to query results.
Submit another query.