DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and gpr35.1

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001104692.1 Gene:gpr35.1 / 796561 ZFINID:ZDB-GENE-080204-17 Length:328 Species:Danio rerio


Alignment Length:258 Identity:57/258 - (22%)
Similarity:105/258 - (40%) Gaps:70/258 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 VLGILGNIISMI-ILSRPQMR-SSINYLLTGLARCDTVLIITSILLFGIPSIYPYTGHFFG---- 183
            |||:||||..:: ...||:.: :.:|..::.:...|..|     |:|....|:.|.....|    
Zfish    37 VLGMLGNIYVLVKFCWRPKTQWTYMNIYISNMVAADCAL-----LIFLPVKIHYYNRELAGGLQK 96

  Fly   184 --------YYNYVYPFISPAVFPIGMIAQTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIY 240
                    ||..:|                .||:....:::.||||:.:|:|||.:.:...|.: 
Zfish    97 LCNFVLSLYYINIY----------------VSIFTITAISVVRYVAIKYPMKAREIFSCRSALV- 144

  Fly   241 FIVCVCFSLAYNMPRFWEVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIHWCYLIVNYIIPF 305
                ||..:...:.....|..||.....|.:....|:.:        ::::.....:||.:::||
Zfish   145 ----VCAVIWVTICSISPVYFVTDSSNDKTMCFQRVKQT--------LSLHFILLLIIVGFVLPF 197

  Fly   306 LTLAILNCLIYRQVKRANRERQRL---SRSEKREIGLATMLLCVVIVF-----FMLNFLPLVL 360
            :      .::|...:..:..|::|   |||||        |.|:.|:.     |::.|.|:.|
Zfish   198 I------IMLYCSARVIHTLRKQLDVGSRSEK--------LQCMFIIMANLIVFIVCFFPVHL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 57/258 (22%)
7tm_1 130..393 CDD:278431 53/253 (21%)
gpr35.1NP_001104692.1 7tm_1 42..295 CDD:278431 53/253 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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