DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and CG33639

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001027070.1 Gene:CG33639 / 32803 FlyBaseID:FBgn0053639 Length:455 Species:Drosophila melanogaster


Alignment Length:393 Identity:89/393 - (22%)
Similarity:153/393 - (38%) Gaps:99/393 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 IVLNHTEV-QTDLQYPHYEDLGLDPDPNWTRICEDVYNPLLENNRIEFWVCGVLINIVGVLGILG 130
            :..|.|.| .:||:...|.|:   .||....:.|..|              |:::.|:..:||:|
  Fly    30 LAANATSVFSSDLRDDFYRDV---EDPRTESLREYCY--------------GLVLPIICAMGIIG 77

  Fly   131 NIISMIILSRPQMRSSINYLLTGLARCDTVLIITSILLFGI---------------PSIYPYTGH 180
            |::::::|:|..||.:. |:.........:|.|...:.|||               |:.  ||.|
  Fly    78 NVLNLVVLTRRNMRGTA-YIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEEFGPAF--YTAH 139

  Fly   181 FFGYYNYVYPFISPAVFPIGMIAQTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIYFIVCV 245
            ...|              :|.......:.|...:|:||||:||||..||.:.. ....:.|:.|:
  Fly   140 LELY--------------LGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMG-PPGVVVFLTCL 189

  Fly   246 CFSLAYNMPRFWEVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIHWCYLIVNYIIPFLTLAI 310
            ...:.| :|..:....:.......||.::..|.:.:.:...:..:|.....:|.. ::|.|.:..
  Fly   190 ATVIVY-LPSIFRGELIKCILGSSDVYVYLRRDNTIYQQTIFYRVYKIMLEVIFK-LVPTLVIGG 252

  Fly   311 LNCLIYRQVKRANRERQR---LSR-----------------------------------SEKREI 337
            ||..| ..|.|...||:|   |||                                   :|:|.:
  Fly   253 LNMRI-MMVYRRTCERRRKMVLSRPHAQGHGHGHGHGHGHGHGHAHGHGYLKDDDPRKFAEERRL 316

  Fly   338 GLATMLLCVVIVFFMLNFLPLV---LNISEAFYSTIDHKITKIS-NLLITINSSVNFLIYIIFGE 398
            .|   ||....:.|::...|:.   :.|:...|.:...::.:.| |||..||.|:.|.||.:|.|
  Fly   317 FL---LLGSTSILFLVCVSPMAILHMTIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLFSE 378

  Fly   399 KFK 401
            .|:
  Fly   379 DFR 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 73/328 (22%)
7tm_1 130..393 CDD:278431 69/319 (22%)
CG33639NP_001027070.1 7tm_1 77..>278 CDD:278431 52/221 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467287
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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