DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and sri-74

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_494299.1 Gene:sri-74 / 191930 WormBaseID:WBGene00005586 Length:324 Species:Caenorhabditis elegans


Alignment Length:372 Identity:74/372 - (19%)
Similarity:133/372 - (35%) Gaps:122/372 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 EDLGLDPDPNWTRICEDVYNPLLENNRIEFWVCGVLINIVGVLGILGNIISMI-----ILSRPQM 143
            ||:... ||:|                        |:|....:|::..|::.|     :....|:
 Worm     2 EDIDFS-DPHW------------------------LLNYFHFIGLVSFILNSIGIYFLMFMSNQL 41

  Fly   144 RSSINYLLTGLARCDTVLIITSILLFGIPSIYPYTGHFFGYYNYVYPFISPAVFP-IGMIAQTAS 207
            .....|||.....|....|..:||:..||....:.||.:|           .||. .|:.|.|.:
 Worm    42 GKFKYYLLLFQLSCVLTDIDFTILVQPIPLFPLFAGHIYG-----------VVFTWFGLPANTGA 95

  Fly   208 IYMTFTVTLE-RYVAVC----HPLKARALCTYGRAKIYFIVCVCFSLAYNMPRFWEVLTVTYPEP 267
            :.:.|...:: ..:.||    |...|..|.|:...|  ||:...:|:.:.:|             
 Worm    96 VTIAFVAAIQIESLLVCFMEKHQGIAILLNTHKVPK--FILNFLYSMCFILP------------- 145

  Fly   268 GKDVILHCVRPSRLRRSETYINIYIHWCY--------LIVNYII----PFLTL------------ 308
                |:.||..:.|..|.....:||...|        .:.|:::    |:.||            
 Worm   146 ----IVMCVWVNSLSLSREEALVYIKEVYPKGYLQFSKLPNFVVYVKSPYTTLLISALFIAGSLG 206

  Fly   309 -AILNCLIYRQVKRANRERQRLSR------SEKRE---IGLATMLLC-------VVIVFFMLNFL 356
             |.|:..||..|:.....:.|:|:      :|...   |...|.:||       ::::.|.:.::
 Worm   207 FACLSLFIYDVVRMMAHLKLRISKLTYEMHNEALRSVIIQFITAVLCLLGPRLLLLVLVFEIPYM 271

  Fly   357 PLVLNISEAFYSTIDHKITKISNLLITINSSVNFLIYIIFGEKFKRI 403
            .|:..:..|::::               :||||.:...||...:.:|
 Worm   272 NLISELLFAWFAS---------------HSSVNMISLFIFFPPYPKI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 64/323 (20%)
7tm_1 130..393 CDD:278431 63/314 (20%)
sri-74NP_494299.1 7TM_GPCR_Sri 2..304 CDD:287317 74/372 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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