DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and sri-45

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_493782.2 Gene:sri-45 / 191917 WormBaseID:WBGene00005557 Length:340 Species:Caenorhabditis elegans


Alignment Length:386 Identity:83/386 - (21%)
Similarity:143/386 - (37%) Gaps:114/386 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 NWTRICEDVYNPLLE--NNRIEFWVCGVLINIVGVLGILGNIISMIILSRPQMRSSINYLLTGL- 154
            |.|.:..|.|..|.:  :..:.||....|.:|..:..:|.|.:.::|:.:.:...:..|.|..| 
 Worm     4 NVTSLQNDYYLNLKDHIDFSVPFWYIPYLTSIGLISLVLNNAVLLLIIFKSEKIDNFKYFLLALQ 68

  Fly   155 ARCDTVLIITSILLFGIPSIY-P-YTGHFFGYYNYVYPFISPAVFPIGMIA--------QTASIY 209
            ..|.......|||.  .|.|| | :|.:..|       ..:.||:...:||        |.|.:.
 Worm    69 VSCMMTDFHLSILC--QPMIYLPIWTTNCLG-------VAASAVWCNSLIALEQGFNTFQYACLL 124

  Fly   210 MTFTVTLERYVAVC-----HPLKARALCTYGRAKIYFIVCVCFSLAYNMPRFW-----------E 258
            ..|   :.|:..:.     |.:.|.|.      |...|....||...:.  ||           .
 Worm   125 FCF---MRRHQTLAKIMNKHVIPATAF------KCLMITGFSFSPLGSF--FWYHAGIAEDLLPG 178

  Fly   259 VLTVTYPE------PGKDVILHCVRPSRLRRSETYINIYIHWCYLI----------VNYIIPFLT 307
            .:.:||||      ..|:..:|            .:|||:   :|:          |..:|...|
 Worm   179 FVNLTYPEFKAEFSNLKNFTIH------------QLNIYM---FLVGVCGFLGIFGVFQVIAMTT 228

  Fly   308 LAILNCLIYRQVKRA------NRERQRLSRSEKREIGLATMLLCVVIVFFMLNFLPL-----VLN 361
            :..:..|  :..:|.      ||::..| ||...:...:|:::.....||::...|:     ::|
 Worm   229 VDTMKML--KGARRTISAQSYNRQKSAL-RSLTAQFLASTLMVLPASSFFVIMTYPIKYGQDIIN 290

  Fly   362 ISEAFYSTIDHKITKISNLLITINSSVNFLIYIIFGEKFKRIFLLIFFKRRLS-RDQPDLI 421
            :|.|.::|               .||||.:|.::....: |.||   |.|.:| |.:|..:
 Worm   291 VSMAIFAT---------------RSSVNAVILVVTTPPY-RAFL---FGRVMSNRQKPSTV 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 67/325 (21%)
7tm_1 130..393 CDD:278431 64/316 (20%)
sri-45NP_493782.2 7TM_GPCR_Sri 20..318 CDD:287317 71/351 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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