DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and sri-19

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_502043.1 Gene:sri-19 / 190552 WormBaseID:WBGene00005531 Length:347 Species:Caenorhabditis elegans


Alignment Length:330 Identity:70/330 - (21%)
Similarity:132/330 - (40%) Gaps:63/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 VLINIVGVLGILGN----------IISMIILSRPQMRSSINYLLTGLARCDTVLIITSILLFGIP 172
            ::.||:|:..|:.|          :|:|.|||.             ||...|.|::..:.:  :|
 Worm    29 LVFNILGIFLIMKNPKIVKMYKGFMINMQILSL-------------LADAQTTLLMQPVYI--LP 78

  Fly   173 SIYPYTGHFFGYYNYVYPFISPAVFPIGMIAQTASIYMTFTVTLERYVAVCHPLKARALCTYGRA 237
            .|..||.........:...|..|:|.:.:..|.|||.... ||....|:....|..|::.     
 Worm    79 IIGGYTNGLLWQVFRLSSHIQMAMFLLLLYLQVASIVCAI-VTKYHVVSNIGKLSDRSIL----- 137

  Fly   238 KIYFIVCVCFSLAYNMPRFWEVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIH------WCY 296
             .:..|.|....|:.:..|:.|..:...|  ::.::....|:.: ...|..|:.|:      | .
 Worm   138 -FWIFVIVYHGCAFVITGFFSVSCLARQE--EENLIKTKFPNAI-SVFTLENVAIYDLQVNKW-M 197

  Fly   297 LIVNYIIPFLTLAILNCLIY---RQVKRANRERQRLSRSEKREIGLA-TMLLCVVIVFFMLNFLP 357
            :|...:..|:..:.:....|   |.:|....:|..:|....|...:| |.|:....|    .||.
 Worm   198 MITTILFAFMLTSSIVISFYFSVRLLKTLPSKRNTISARSFRGHQIAVTSLMAQATV----PFLV 258

  Fly   358 LVLNISEAFYSTIDHKI---TKISNLLITI---NSSVNFLIYIIFGEKFKRIFLLIFFKRRLSRD 416
            |::.|....|..: |.:   .:|||:::.:   ::|::..:.||...:::::.      ||..|.
 Worm   259 LIIPIGTIVYLFV-HVLPNAQEISNIMMAVYSFHASLSTFVMIISTPQYRKMI------RRGFRA 316

  Fly   417 QPDLI 421
            |..:|
 Worm   317 QHPII 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 62/297 (21%)
7tm_1 130..393 CDD:278431 59/288 (20%)
sri-19NP_502043.1 7TM_GPCR_Sri 8..310 CDD:287317 65/311 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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