DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and sri-6

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001256481.1 Gene:sri-6 / 188328 WormBaseID:WBGene00005518 Length:344 Species:Caenorhabditis elegans


Alignment Length:334 Identity:65/334 - (19%)
Similarity:114/334 - (34%) Gaps:82/334 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 INIVGVLGILGNIIS--MIILSRPQMRSSINYLLTGLARCDTVLIITSILL-FGIPSIYPYTGHF 181
            ::|:|.:.|..|:::  ||....|.|.        |...|.|.:.:.|.:: ..:..:.| ..||
 Worm    17 LSIIGGISIPMNLLALYMIWFQSPGMH--------GYKYCLTYMQVASFIVEINVTWLVP-AYHF 72

  Fly   182 FGYYNYVYPFISPAVFPIGMIAQTASIYMTFTVTLERYVAVCHPLKARALCTYGR---------- 236
            |.        ::..:....:|.:..|.:...|:.:..:   |..|.|..||.:.|          
 Worm    73 FP--------LTGGIAAGEIIRKFVSNHTGVTIWIFLF---CFLLPASLLCLFYRHNAASKINQS 126

  Fly   237 -------AKIYFIVCVCF---------SLAYNMPRFWEVLTVTYPEPGKDVILHCVRPSRLRRSE 285
                   .|:..|:...|         :......:.:|.|:..|||        |:......|.|
 Worm   127 GSNNLYLEKLVMILTHIFPFLTAFGTWNCQMTFAQKYEYLSQNYPE--------CLFWLASDRFE 183

  Fly   286 TYINIYIHWCYLIVNYIIPFLTLAI-------LNCLIYRQVKRANRERQRLSRSEKREIGLATML 343
            .|......|........|.||.:..       ::.:|..|..||:...|.........|.||..:
 Worm   184 AYDYKMNPWIVSTAAAAITFLVITASYGGYHGIHTMIILQRLRAHMSVQTYQMHITALISLALQM 248

  Fly   344 LC---------VVIVFFMLNFLPL--VLNISEAFYSTIDHKITKISNLLITINSSVNFLIYIIFG 397
            |.         |.:...:.|.:.|  :::.|....||  |.|...|.:::|     |.....:..
 Worm   249 LTPSVFAVPVYVWVTVVLTNAIDLQGIVSWSPCLMST--HSILMSSVMIVT-----NATYRRVLK 306

  Fly   398 EKFKRIFLL 406
            ||..::|:|
 Worm   307 EKISKLFML 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 61/318 (19%)
7tm_1 130..393 CDD:278431 58/309 (19%)
sri-6NP_001256481.1 7TM_GPCR_Sri 3..305 CDD:287317 61/322 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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