DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and sri-26

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_506759.1 Gene:sri-26 / 183389 WormBaseID:WBGene00005538 Length:322 Species:Caenorhabditis elegans


Alignment Length:356 Identity:72/356 - (20%)
Similarity:142/356 - (39%) Gaps:91/356 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ENNRIEFWVCGVLIN---IVGVLGILGN--IISMIILSRPQMRSSINYLLTGLARCDTVLIITSI 166
            |.:.|||.|...||:   |.|.:.::.|  :|..:|....::.|...|||.....| .:|:..:.
 Worm     3 EYSNIEFEVPQFLIHHYYISGAIAVVFNCLVIYFLIFHSGRIGSFKFYLLGFQISC-VLLVFHAT 66

  Fly   167 LLFGIPSIYPYTGHFFGYYNYVYPFISPAVFPIGMIAQTASIYMTFTV-------TLERYVAVCH 224
            :|....|:.|...   ||.|             |:::.|.|.:...|:       .|: .:::|.
 Worm    67 VLMEPLSLSPICA---GYSN-------------GLLSNTLSTHALLTIFALLVSSQLD-ILSICF 114

  Fly   225 PLKARALCTYGRAK-------------IYFIVCVCFSLAYNM-------PRFWEVLTVTYPEPGK 269
            ..|.|.:.   |.|             |.|.:....|:|:.:       .:..|:|.:.:|    
 Worm   115 LQKHRVIM---RLKSLPVISTGMYTSIIVFSIVFHLSMAFTLNMSNASREKQMEILDILFP---- 172

  Fly   270 DVILHCVRPSRLRRSETYINIYIHWCYLIVNYIIPFLTLA--------ILNCLIYRQVKRANRER 326
                        ..|..:.::.....|...:::|.|:|..        :|..::..|:.|..:|.
 Worm   173 ------------ALSFKFRSLPEFQYYAFNSWMIAFVTQTMFGTMKSFVLVVIMVIQMYRTLKEV 225

  Fly   327 Q-RLSRS--EKREIGLATML--LCVVIVFFMLNFLPL-VLNISEAFYSTIDHKITKISNLLITIN 385
            | :||.:  .|.:..|.:::  .|..    .:..||. :..::..|.|....|::....:::|.:
 Worm   226 QCKLSSTTIAKHKSALRSLVAQFCTT----PIAMLPAGITTLTVLFPSQYSQKVSWYCMMVMTAH 286

  Fly   386 SSVNFLIYIIFGEKF-KRIFLLIFFKRRLSR 415
            |::|.::.|:...:| ||:|   |:::.|.|
 Worm   287 STINSIVIILTYPEFRKRLF---FWEKNLKR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 57/314 (18%)
7tm_1 130..393 CDD:278431 55/305 (18%)
sri-26NP_506759.1 7TM_GPCR_Sri 6..305 CDD:287317 66/339 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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