DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and srsx-11

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_504338.2 Gene:srsx-11 / 182572 WormBaseID:WBGene00015736 Length:310 Species:Caenorhabditis elegans


Alignment Length:334 Identity:58/334 - (17%)
Similarity:119/334 - (35%) Gaps:94/334 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LINIVGVLGIL--GNIISMIILSRPQMRSSINY--LLTGLARCDTVLIITSILLF-GIPSIYPYT 178
            :.:|:..:|.:  |||.....|:|.:....|.:  |.........|:|:..||:| ..|:.|   
 Worm    52 VFHIICQVGTMFDGNITLGNQLNREECYQIIAFYVLFQSAQSVIMVVIVLDILIFVKFPTFY--- 113

  Fly   179 GHFFGYYNYVYPFISPAVFPIGMIAQTASIYMT---FTVTLERYVAVCHPLKARALCTYGRAKIY 240
             .......|::....|.:        |.||.:|   :|.|.|.::..|.|..|   .|...::||
 Worm   114 -RNISKSQYIFVTTFPVI--------TCSIIITVYGYTATNEDWIPACTPGFA---FTIEASRIY 166

  Fly   241 FIVCVCFSLAYNMPRFWEVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIHWCYLIVNYIIPF 305
            .:..:..|:         .:||.|.                        :.|...||        
 Worm   167 KLFILLMSV---------FVTVIYA------------------------VLIRTFYL-------- 190

  Fly   306 LTLAILNCLIYRQVKRANRERQRLSRSEKR---EIGLATMLLCVVIVFFMLNFLPLVLNISEAFY 367
                           :.:.|.....::.||   .:|     :.:...||...|..::|.::|  |
 Worm   191 ---------------KGHHENSSSLKTMKRLQFSVG-----IFIFTWFFSQIFGLIILQMTE--Y 233

  Fly   368 STIDHKITKISNLLITINSSVNFLIYIIFGEKFKRIFLLIFFKRRLSRDQPDLIH-----YESSI 427
            :..:..:...::||.::..|..|.:.:...:::::.|..:::.:::......:.|     ::||.
 Worm   234 TAFEASLFAHNSLLTSLAYSNTFYVTMWRSKEYRKQFYSVWWPKKVQTSSAIVFHTNFILHKSST 298

  Fly   428 SNNGDGTLN 436
            .:.....||
 Worm   299 MDFSASRLN 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 52/282 (18%)
7tm_1 130..393 CDD:278431 50/271 (18%)
srsx-11NP_504338.2 7TM_GPCR_Srsx 19..274 CDD:255903 53/299 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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