DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and GPR139

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001002911.1 Gene:GPR139 / 124274 HGNCID:19995 Length:353 Species:Homo sapiens


Alignment Length:344 Identity:84/344 - (24%)
Similarity:145/344 - (42%) Gaps:72/344 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 EDVYNPLLENNRIEFW----VCG------VLINIVGVLGILGNIISMIILSR---PQMRSSINYL 150
            |..:..|..|:.:.:|    .||      |..:::..||:..||:::||||:   .:.:||.|||
Human     2 EHTHAHLAANSSLSWWSPGSACGLGFVPVVYYSLLLCLGLPANILTVIILSQLVARRQKSSYNYL 66

  Fly   151 LTGLARCDTVLIITSILLFGIPSIYPYTGHFFGYYNYVYPFISPAVFPIGMIAQT-ASIYMTFTV 214
            | .||..|.      ::||.|..:......|.  .|...|.:...:..:...:.. .||::|..:
Human    67 L-ALAAADI------LVLFFIVFVDFLLEDFI--LNMQMPQVPDKIIEVLEFSSIHTSIWITVPL 122

  Fly   215 TLERYVAVCHPLKARALCTYGRAK----IYFIVCVCFSLAYN-MPRFWEVLTVTYPEPGKDVILH 274
            |::||:|||||||...:....|.:    ..:|.|...|:.|. .|..|                 
Human   123 TIDRYIAVCHPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWPNIW----------------- 170

  Fly   275 CVRPSRLRRSETYINIYIH----WCYLIVNYIIPFLTLAILNCLIYRQVKRANRERQRLSRSEKR 335
                     :|.||:..:|    |.:....|::|.....|||.:|..:::|.:..|.|     ..
Human   171 ---------TEDYISTSVHHVLIWIHCFTVYLVPCSIFFILNSIIVYKLRRKSNFRLR-----GY 221

  Fly   336 EIGLATMLLCVVIVFFMLNFLPLVLNISEAFYST------IDHKITKISNLLITINSSVNFLIYI 394
            ..|..|.:|..:...|...:.|.::.|....|..      :.|.::.|:|:|..:|:::||.:|.
Human   222 STGKTTAILFTITSIFATLWAPRIIMILYHLYGAPIQNRWLVHIMSDIANMLALLNTAINFFLYC 286

  Fly   395 IFGEKFKRI---FLLIFFK 410
            ...::|:.:   .|..|||
Human   287 FISKRFRTMAAATLKAFFK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 71/290 (24%)
7tm_1 130..393 CDD:278431 69/281 (25%)
GPR139NP_001002911.1 7tmA_GPR139 27..296 CDD:320585 74/308 (24%)
TM helix 1 29..53 CDD:320585 8/23 (35%)
TM helix 2 63..85 CDD:320585 10/28 (36%)
TM helix 3 102..124 CDD:320585 3/21 (14%)
TM helix 4 147..163 CDD:320585 3/15 (20%)
TM helix 5 181..204 CDD:320585 5/22 (23%)
TM helix 6 227..249 CDD:320585 4/21 (19%)
TM helix 7 264..289 CDD:320585 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157866
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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