DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and gpr142

DIOPT Version :10

Sequence 1:NP_647758.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_031750683.1 Gene:gpr142 / 100486047 XenbaseID:XB-GENE-990349 Length:338 Species:Xenopus tropicalis


Alignment Length:381 Identity:89/381 - (23%)
Similarity:154/381 - (40%) Gaps:90/381 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QNNSQPTLQIVLNHTEVQTDLQYPHYEDLGLDPDPNWTRICEDVYNPLLENNRIEFWVCGVLINI 122
            ||:|:|....|::...|.             ||.|....|...:|..:|        :|      
 Frog     5 QNSSEPLQPGVMDEGNVS-------------DPSPCVLGIIPVIYYSIL--------LC------ 42

  Fly   123 VGVLGILGNIISMIILSRPQMR---SSINYLLTGLARCDTVLIITSIL--LFGIPSIYPYTGHFF 182
               ||:..|:::.:.|||...|   ||.:|||        .|.|:.||  :|.|         |.
 Frog    43 ---LGLPVNMLTAVALSRLASRTKKSSYSYLL--------ALTISDILSQIFII---------FV 87

  Fly   183 GY-------YNYVYPFISPAVFPIGMIAQTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIY 240
            |:       :..|...:...|..:...:..|||::|..:|::||||:|:||:.|:.....|.:..
 Frog    88 GFILQTAILHRKVPSTLIHVVSVLEFSSNHASIWVTVILTVDRYVALCYPLQYRSFSYPERTRRV 152

  Fly   241 FIVCVCFSLAYNMPRFWEVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIHWCYLIVNYIIPF 305
            .:.....|....:|.:|      :.:..:|           .|:...:::.:.|.:..:.|.||.
 Frog   153 IVFVFLSSFVTGVPFYW------WSDVWRD-----------PRTPGLLDLILKWTHCFIIYFIPC 200

  Fly   306 LTLAILN-CLIYRQVKRANRERQRLSRSEKREIGLATMLLCVVIVFFMLNFLPLVLNISEAFYST 369
            ....|.| .:|||..||...::.:|...:...|     ||.:..||.:|.....::.|...:.|:
 Frog   201 TIFLITNSVIIYRLRKRTGSKKCQLRNGKTTAI-----LLGITSVFAVLWAPRTIVIIIHMYVSS 260

  Fly   370 ID-----HKITKISNLLITINSSVNFLIYIIFGEKFK---RIFLLIFFKRRLSRDQ 417
            ::     |....|.|:|..:|::|||.:|.....:|:   |..|.||.:..:...|
 Frog   261 VNKDWKVHLAMDIGNMLALLNTAVNFFLYCFVNRRFRDTVREILGIFRRCHMKEGQ 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_647758.1 7tmA_FMRFamide_R-like 114..404 CDD:410630 73/310 (24%)
TM helix 1 115..141 CDD:410630 6/25 (24%)
TM helix 2 147..172 CDD:410630 8/26 (31%)
TM helix 3 193..223 CDD:410630 10/29 (34%)
TM helix 4 235..255 CDD:410630 2/19 (11%)
TM helix 5 289..314 CDD:410630 6/25 (24%)
TM helix 6 334..362 CDD:410630 6/27 (22%)
TM helix 7 372..397 CDD:410630 9/24 (38%)
gpr142XP_031750683.1 7tmA_GPR142 31..300 CDD:320257 75/324 (23%)
TM helix 1 32..58 CDD:320257 8/42 (19%)
TM helix 2 66..91 CDD:320257 12/41 (29%)
TM helix 3 105..135 CDD:320257 10/29 (34%)
TM helix 4 147..167 CDD:320257 2/19 (11%)
TM helix 5 184..209 CDD:320257 6/24 (25%)
TM helix 6 225..257 CDD:320257 8/36 (22%)
TM helix 7 268..293 CDD:320257 9/24 (38%)

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