DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and gpr142

DIOPT Version :9

Sequence 1:NP_001261347.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_001340684.2 Gene:gpr142 / 100000501 ZFINID:ZDB-GENE-130603-30 Length:362 Species:Danio rerio


Alignment Length:361 Identity:86/361 - (23%)
Similarity:156/361 - (43%) Gaps:84/361 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LGILGNIISMIILSRPQMRS--SINYLLTGLARCDTVLIITSILLFGIPSIYPYTGHFFGYYNYV 188
            :|:..||::::.|.|..:|:  ::...|..|...|   |::.:.:.           |.|:    
Zfish    41 VGVPVNILTLVALYRLVVRTQKALYVYLLALTGSD---ILSQLFII-----------FVGF---- 87

  Fly   189 YPFISPAVF----PIGMI---------AQTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIY 240
              .:..|||    |:.::         |..|||:.|..:|::||||:||||..|.:....||:..
Zfish    88 --LLETAVFHRDVPVLLLRSVSMMEFSANHASIWATVPLTVDRYVALCHPLLHRQISYPARARRI 150

  Fly   241 FIVCVCFSLAYNMPRFW--EVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIHWCYLIVNYII 303
            ..|.:..:||..:|.||  ::..|:: ||..                  ::..:.|.::.:.|.:
Zfish   151 IAVVLTLALASGVPFFWWSDMWRVSH-EPNN------------------LDTALIWTHVTIIYFL 196

  Fly   304 PFLTLAILNCLIYRQVKRANRERQRLSRSEKRE-------IGLAT-MLLCVVIVFFMLNFLPLVL 360
            |.....:||.||..::::  |:||::.:.|..:       :|..| |||.|..||.:| :.|...
Zfish   197 PCCIFLVLNSLIILRLRK--RQRQQMCQDESGQQLAVPSRLGKTTAMLLAVTSVFAVL-WAPRTG 258

  Fly   361 NISEAFYSTIDHKITKI------SNLLITINSSVNFLIYIIFGEKFKRIF--LLIFFKRRLSRDQ 417
            .:....|.|..|...::      :|:|..:|::|||.:|....:.|:...  :|:|      |..
Zfish   259 VVLYHLYVTSVHNDWRVHLAYDLANMLAMLNTAVNFFLYCFVSKPFRAAVRDVLLF------RGA 317

  Fly   418 PDLIHYESSISNNGDGTLNHRSSGRFSRHGTQRSTT 453
            |  :|....:.|... ..|..:|...|...:||..|
Zfish   318 P--LHPRRPLRNQRT-PANASTSSISSTKRSQREVT 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_001261347.1 7tm_4 122..394 CDD:304433 72/298 (24%)
7tm_1 130..393 CDD:278431 71/293 (24%)
gpr142XP_001340684.2 7tm_4 40..315 CDD:304433 76/321 (24%)
7tm_1 46..297 CDD:278431 71/292 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593668
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6566
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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