DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFaR and gpr142

DIOPT Version :10

Sequence 1:NP_647758.1 Gene:FMRFaR / 38357 FlyBaseID:FBgn0035385 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_001340684.3 Gene:gpr142 / 100000501 ZFINID:ZDB-GENE-130603-30 Length:362 Species:Danio rerio


Alignment Length:361 Identity:86/361 - (23%)
Similarity:156/361 - (43%) Gaps:84/361 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LGILGNIISMIILSRPQMRS--SINYLLTGLARCDTVLIITSILLFGIPSIYPYTGHFFGYYNYV 188
            :|:..||::::.|.|..:|:  ::...|..|...|   |::.:.:.           |.|:    
Zfish    41 VGVPVNILTLVALYRLVVRTQKALYVYLLALTGSD---ILSQLFII-----------FVGF---- 87

  Fly   189 YPFISPAVF----PIGMI---------AQTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIY 240
              .:..|||    |:.::         |..|||:.|..:|::||||:||||..|.:....||:..
Zfish    88 --LLETAVFHRDVPVLLLRSVSMMEFSANHASIWATVPLTVDRYVALCHPLLHRQISYPARARRI 150

  Fly   241 FIVCVCFSLAYNMPRFW--EVLTVTYPEPGKDVILHCVRPSRLRRSETYINIYIHWCYLIVNYII 303
            ..|.:..:||..:|.||  ::..|:: ||..                  ::..:.|.::.:.|.:
Zfish   151 IAVVLTLALASGVPFFWWSDMWRVSH-EPNN------------------LDTALIWTHVTIIYFL 196

  Fly   304 PFLTLAILNCLIYRQVKRANRERQRLSRSEK-------REIGLAT-MLLCVVIVFFMLNFLPLVL 360
            |.....:||.||..::::  |:||::.:.|.       .::|..| |||.|..||.:| :.|...
Zfish   197 PCCIFLVLNSLIILRLRK--RQRQQMCQDESGQQLAVPSKLGKTTAMLLAVTSVFAVL-WAPRTG 258

  Fly   361 NISEAFYSTIDHKITKI------SNLLITINSSVNFLIYIIFGEKFKRIF--LLIFFKRRLSRDQ 417
            .:....|.|..|...::      :|:|..:|::|||.:|....:.|:...  :|:|      |..
Zfish   259 VVLYHLYVTSVHNDWRVHLAYDLANMLAMLNTAVNFFLYCFVSKPFRAAVRDVLLF------RGA 317

  Fly   418 PDLIHYESSISNNGDGTLNHRSSGRFSRHGTQRSTT 453
            |  :|....:.|... ..|..:|...|...:||..|
Zfish   318 P--LHPRRPLRNQRT-PANASTSSISSTKRSQREVT 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FMRFaRNP_647758.1 7tmA_FMRFamide_R-like 114..404 CDD:410630 74/308 (24%)
TM helix 1 115..141 CDD:410630 4/14 (29%)
TM helix 2 147..172 CDD:410630 4/24 (17%)
TM helix 3 193..223 CDD:410630 14/42 (33%)
TM helix 4 235..255 CDD:410630 5/19 (26%)
TM helix 5 289..314 CDD:410630 5/24 (21%)
TM helix 6 334..362 CDD:410630 10/35 (29%)
TM helix 7 372..397 CDD:410630 8/30 (27%)
gpr142XP_001340684.3 None

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