DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and cpt1b

DIOPT Version :10

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_012822209.2 Gene:cpt1b / 780223 XenbaseID:XB-GENE-5931920 Length:809 Species:Xenopus tropicalis


Alignment Length:632 Identity:186/632 - (29%)
Similarity:295/632 - (46%) Gaps:84/632 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMEL--H 92
            :..|:.|.|| ||.|||:||:|.||::..|:|::.:|||...:.::.:...|:|::.:|.:|  :
 Frog   194 IMSSRQPMLYSFQMSLPKLPVPPLEDTIERYLQSVRPLLDDDKFSEMKILAEEFQKDLGRKLQKY 258

  Fly    93 AKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSL 156
            ..|||..|.|    |:|..|.: :||..|.|:.:|.|...:......|. ..|..||.|:|.:.|
 Frog   259 LHLKSWWALN----YVSDWWEEYIYLRGRGPIMVNSNYYAMDYLYVTPS-TNQAARAGNVIHAML 318

  Fly   157 RFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSR 221
            .:.|.|:..|:.|.:                              |....|:..:|..|:|.|:|
 Frog   319 LYRRKLERGLIPPVM------------------------------ALGIVPMCSNQMVRMFNTTR 353

  Fly   222 IPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAASVPL 286
            :|.:..|.|....:::|:.|..:|..|.: .|..:|.:.:|..:..:::.:|...:..:.....|
 Frog   354 VPGVETDCLQHLVESRHVCVYHKGRYYRL-ALYENGNLLTPRQLQSQIQYILDDSSPPQPGEEKL 417

  Fly   287 GVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPL---LKHLL 348
            ..||:|.|..||:.|.:|.||..|...|.. |:.|:|.:.||.||.| :||..:..|   .|.||
 Frog   418 AALTAGNRVHWAQARTNFFSNGINRTALSC-VERAVFFISLDEEEAG-YNEEDKSSLSAYSKALL 480

  Fly   349 AGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQP-FVSTETVHTPAE 412
            .|...|||||||.||::..:|...:|.||||.|...:    ..|::.||... |....|......
 Frog   481 HGNCYNRWFDKSFSLVVFRNGKLGLNAEHSWADAPII----GHLWEFTLATDCFELGYTEDGNCR 541

  Fly   413 GDFSNVRP----INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSII 473
            ||..:..|    :.::|....:..:..:|....:|.|::|.:.|.:....|...|:...|||:..
 Frog   542 GDAGSPLPPPYRLQWDIPPKCREVIERSYVTAKAIADDVDFHCLCFSDFGKGLIKKCRSSPDAFF 606

  Fly   474 QLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRAM 538
            |::.|||:.:....:..:||:..|..||.|||||:|.||..|.||.:|:..|.:|:    |.|..
 Frog   607 QIALQLAHYREKGHFCLTYEASMTRLFRDGRTETVRSCTTQTCDFVKAMEDPTQSQ----EKRLA 667

  Fly   539 IDNCSKVHGQLTKEAAM-GQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINNNIISTSTLG 600
            :...:..|.||....|| |:|.|||||.|...::..|.....|.:  :|.::      :|||...
 Frog   668 LYRAAAEHHQLMYRWAMTGKGIDRHLFCLYIVSKYLGTDSAFLQKVLSEPWR------LSTSQTP 726

  Fly   601 SDAL-------------LAGSFGPVVKNGFGIGYSIQNDFAGAIVTT 634
            ...|             ..|.||||..:|:|:.|.    |||..:.|
 Frog   727 QQQLKLFDLDKFPDHVSAGGGFGPVADDGYGVSYI----FAGENLIT 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 177/614 (29%)
cpt1bXP_012822209.2 CPT_N 39..85 CDD:465132
Carn_acyltransf 212..792 CDD:459926 177/614 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.