DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and Crot

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_076222.1 Gene:Crot / 74114 MGIID:1921364 Length:612 Species:Mus musculus


Alignment Length:646 Identity:178/646 - (27%)
Similarity:306/646 - (47%) Gaps:89/646 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMELHAKLKSHDAEN 102
            |..:|.|||.||:|.||.|.:::||:.||..:..|..:|::.|::|::|.|..||.||... |..
Mouse    13 TFQYQDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLER-ARG 76

  Fly   103 KHTSYISQPWFDM-YLADRAPLPLNYN---PLLVMKSDARPEYQQ--------QVVRATNLIISS 155
            |. :::.:.|.:: ||..|.|..||.|   |.        |.::.        |:.|.:.::..:
Mouse    77 KR-NWLEEWWLNVAYLDVRIPSQLNVNFVGPC--------PHFEHYWPAREGTQLERGSMMLWHN 132

  Fly   156 LRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTS 220
            |.:|:.|:.:.|...      |..:|                         ||||:|:..||.|.
Mouse   133 LNYWQLLRREKLPVH------KSGNT-------------------------PLDMNQFRMLFSTC 166

  Fly   221 RIPRIGKDELV-------QSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDAD 278
            ::|.|.:|.::       :.....||.|:.||..:..:|| ..|.:.:|..:|.:|..:.| ...
Mouse   167 KVPGITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVL-HEGCLITPPELLRQLTYIHK-KCS 229

  Fly   279 REAASVPLGVLTSGQRDEWAKTRQHFVS-NTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEP 342
            .|.....:..|||.:|..|||.|::.:| :.:|..|||: :..:||...::........|...: 
Mouse   230 NEPVGPSIAALTSEERTRWAKAREYLISLDPENLTLLEK-IQTSLFVYSIEDSSPHATPEEYSQ- 292

  Fly   343 LLKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDG---VAVLRYFNELYKDTLKQPFVST 404
            :.:.||.|....||.|||.:|:..|:|......:|:..|.   |.:..|.:|...:| :..:..:
Mouse   293 VFEMLLGGDPSVRWGDKSYNLISFANGIFGCCCDHAPYDAMVMVNIAHYVDERVLET-EGRWKGS 356

  Fly   405 ETVHTPAEGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSP 469
            |.|.     |......:.|.:|:...:.||:|..::.....:|.:....:....|...|:..|.|
Mouse   357 EKVR-----DIPLPEELVFTVDEKILNDVSQAKAQHLKAASDLQIAASTFTSFGKKLTKEEALHP 416

  Fly   470 DSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGE 534
            |:.|||:.||||.:.:......||:..|..|.||||||:|.||.....:|:::     ..|||..
Mouse   417 DTFIQLALQLAYYRLHGRPGCCYETAMTRYFYHGRTETVRSCTVEAVRWCQSM-----QDPSASL 476

  Fly   535 L---RAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEAYKRI---NNNI 593
            |   :.|::..:| |.::.|:.:.|:||||||..|...|::||:|:|:|:|...:.|.   .|.:
Mouse   477 LERQQKMLEAFAK-HNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFV 540

  Fly   594 ISTSTLGSDALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKN--QADGKVFIDSLESAF 652
            :|||.:|. ..:.|...|:|.||:|..|.|::|......:::::  :.|.:..:..:..||
Mouse   541 LSTSLVGY-LRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAF 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 175/639 (27%)
CrotNP_076222.1 Carn_acyltransf 20..603 CDD:395612 175/639 (27%)
Coenzyme A binding. /evidence=ECO:0000250 410..417 2/6 (33%)
Microbody targeting signal. /evidence=ECO:0000255 610..612
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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