DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and crot

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001128278.1 Gene:crot / 733879 XenbaseID:XB-GENE-988067 Length:481 Species:Xenopus tropicalis


Alignment Length:522 Identity:148/522 - (28%)
Similarity:233/522 - (44%) Gaps:96/522 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMELHAKLKSHDAEN 102
            |..:|.|||.||:|.|..|..::.:|.||.|:..|..:|.|.|:.|..|||.|||.||.......
 Frog    13 TFQYQDSLPPLPVPSLAESLSKYCDAVKPFLNQEEYERTCQIVKAFENGIGKELHQKLLQRARFK 77

  Fly   103 KHTSYISQPWFD-MYLADRAPLPLNYN---PLLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQ 163
            |  :::.:.|.: .||..|.|..||.|   |...::.....|...|:.||:..:..:|::|..::
 Frog    78 K--NWLEEWWLNAAYLDVRMPSQLNVNFGGPAPYLEHYWPAEKGTQLQRASIAVWYTLKYWELIR 140

  Fly   164 ADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKA--FPLDMSQYNRLFGTSRIPRIG 226
            .:.|.                                 ..||  :||||||:..||.|.:||  |
 Frog   141 REKLG---------------------------------VHKAVNYPLDMSQFRNLFNTCKIP--G 170

  Fly   227 KDELVQSPDAK---------HILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAA 282
            :...:.|...|         |:.||.||.::..:.: ..|.|.:|..:|.:|:.:..: ...|.|
 Frog   171 RTRDIISSRFKTESEGSCPTHLAVMARGRIFTFDAV-PEGQILTPPELLRQLQYIQDI-CQTEPA 233

  Fly   283 SVPLGVLTSGQRDEWAKTRQHFVS-NTKNADLLEREVDAALFCVCLDGEED-GVFNENQQEPLLK 345
            .:.|..||:.:|..||:.|:|.:| :..|:..|| ::.::||.:.||.... |...:..|..:: 
 Frog   234 GIGLSALTTEERTRWAQIREHLISLDPMNSTHLE-DIQSSLFILSLDSASPYGTPEDYSQIAMM- 296

  Fly   346 HLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDG---VAVLRYFNELYKDTLKQPFVSTETV 407
             .|||....||.|||.:|:..::|....|.:|:..|.   ||:..|.::..|             
 Frog   297 -ALAGDPTVRWGDKSYNLIAWSNGVFGSNCDHAPYDAMVLVAMCDYIDQNVK------------- 347

  Fly   408 HTPAEG---------DFSNVRPINFEIDDATKSAVS---EAYNKNASIVDNLDMNVLKY--PHIN 458
              ..||         :..|.:.:.|.:|......::   |.|.|.||     |:.::.|  ....
 Frog   348 --ACEGRWKGSAAVRELPNPKELVFTVDQKILKDIAIAKEQYYKQAS-----DLQIVNYAFTSFG 405

  Fly   459 KPTCKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAIL 523
            |...|:..|.||:.:||:.||||.:.:......||:.:|..|.|||||||||||.....:|.::|
 Frog   406 KQLVKKKKLHPDTFVQLALQLAYYKIHGCPGCCYETATTRMFYHGRTETMRPCTVEAATWCRSML 470

  Fly   524 QP 525
            .|
 Frog   471 DP 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 145/515 (28%)
crotNP_001128278.1 Carn_acyltransf 20..>475 CDD:279140 145/515 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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