DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and crata

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001027489.1 Gene:crata / 613081 XenbaseID:XB-GENE-996699 Length:625 Species:Xenopus tropicalis


Alignment Length:650 Identity:168/650 - (25%)
Similarity:296/650 - (45%) Gaps:64/650 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SKLPTLYF--QRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFR-QGIGMELHAKL 95
            :|||..|.  |..||.||:|.|:.:..::|.|.|||:|..|.:.|:..||.|| .|:|..|...|
 Frog    22 AKLPGRYLAHQEGLPCLPVPPLQQTLDKYLLALKPLVSLEEWSLTRVLVEDFRTSGVGERLQKGL 86

  Fly    96 KSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRFW 159
            :..  ..|..:::|:.|.. .||..|.|:.::.||.:|:......:.|.|:..|..||...|.|.
 Frog    87 ERR--ARKTENWLSEWWLQTAYLEYRMPVVVHSNPGVVLPKQDFEDRQGQLRFAAKLIEGVLDFK 149

  Fly   160 RSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPR 224
            ..:..:.|..|  ::..|                             ||.|:||.::..:.|||.
 Frog   150 TMVDNETLPVE--YLGGK-----------------------------PLCMNQYYQMLSSCRIPG 183

  Fly   225 IGKDELVQSPDAK----HILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAV--LKLDADREAAS 283
            ..:|.:.....|.    ||.|:.....:.::|.:|.|...:...|..:|..:  ..|..::|   
 Frog   184 PKRDTVANYSQASKPPTHITVVHNFQFFELDVYNSDGTPLTSDQIFTQLEKIWGTSLQTNKE--- 245

  Fly   284 VPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPLLKHLL 348
             |:|:||:..|:.|||...:.:.:..|.:.: |.:..::|.||||.....|.::..|..:...:|
 Frog   246 -PIGILTTNHRNSWAKAYNNLIKDKTNKESV-RTIQKSIFTVCLDAPIPRVSDDLYQSQVAAQML 308

  Fly   349 AG-----KAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTETVH 408
            .|     .:.||||||::..:::.||:..:.:||:..:|..::...:.:.:.|.:...:.:..:.
 Frog   309 HGGGSRWNSGNRWFDKTLQFIVAEDGSCGLVYEHAPAEGPPIVALIDHVVEYTKRPELIRSPMMP 373

  Fly   409 TPAEGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSII 473
            .|..      :.:.|.|....|:.:.:|......:|.:||:.|..:....|...|...||||:.|
 Frog   374 LPMP------KKLRFNITPEIKNDIEKAKQNLNIMVHDLDVKVFVFSVFGKNFPKSEKLSPDAFI 432

  Fly   474 QLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRAM 538
            ||:.||:|.:.|.....:|||.|...||.|||:|:|..:..:.:|.:|:..|.:......:|   
 Frog   433 QLALQLSYYRMYKQVCATYESASLRMFRLGRTDTIRSASIDSENFVQAMDDPSKQNQEKVDL--- 494

  Fly   539 IDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTLGSDA 603
            :....:.|...|..|..|...||||..|:..|.::.:.:|:|:...:|....:..:|||.:.:..
 Frog   495 LRKAVQAHRAYTDMAINGNAIDRHLLGLKLQAIEDLVSMPELFMDTSYAVAMHFNLSTSQVPAKT 559

  Fly   604 LLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKNQADGKV--FIDSLESAFDKICAVIQQSSSSK 666
            .....|||||.:|:|:.|:...|.....|:.:.:.|:...  ....||.|...:..::|::..||
 Frog   560 DCVMCFGPVVPDGYGVCYNPMEDHINFAVSAFNSCAETNAARLAHYLERALCDMQQLVQRTPKSK 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 160/624 (26%)
crataNP_001027489.1 Carn_acyltransf 35..614 CDD:376382 160/625 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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