DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and cpt1ab

DIOPT Version :10

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_021329547.2 Gene:cpt1ab / 560000 ZFINID:ZDB-GENE-030131-3250 Length:775 Species:Danio rerio


Alignment Length:677 Identity:197/677 - (29%)
Similarity:302/677 - (44%) Gaps:126/677 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TRVHRN-----LSWISTNSSRTTTTHG----QHYQ-------YLQCSKL-----PTLY-FQRSLP 46
            |.|.||     |||           ||    ||..       :|...||     |.|| ||.|||
Zfish   120 TFVMRNALKYLLSW-----------HGWMFNQHGTLSLKTKIWLVLVKLFSGPKPMLYSFQSSLP 173

  Fly    47 RLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMEL--HAKLKSHDAENKHTSYIS 109
            |||:|.::::.||:||:.:||:...:..:.:...:.|.:.:|.:|  :.||||....|    |:|
Zfish   174 RLPVPPVKDTVRRYLESARPLMDDEQYKRMEGLAKDFEKNLGPKLQWYLKLKSWWTSN----YVS 234

  Fly   110 QPWFD-MYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQADLLEPEVYH 173
            ..|.: :||..|:|:.:|.|...:......|. ..|..||.|.|.:.:.:.|.|....::| :|.
Zfish   235 DWWEEYIYLRGRSPIMVNSNYYAMDFLYVNPT-SLQAARAGNSIHAMMMYRRKLDRAQIKP-LYL 297

  Fly   174 MNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDELVQSPDAKH 238
            :..:                            .||..:|:.|:|.|.|||.:..|.|....::||
Zfish   298 LENR----------------------------VPLCSAQWERMFNTCRIPGLETDVLQHVNESKH 334

  Fly   239 ILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAASVPLGVLTSGQRDEWAKTRQH 303
            |.|..:|..|.|.:. ..|.:..|..|..::..:|...::.:.....|..||:|.|..|||.|..
Zfish   335 IAVYHKGRFYKVWMF-YDGRLLLPREIEQQMERILADKSEPQPGEEFLAALTAGDRVPWAKARSQ 398

  Fly   304 FVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPL---LKHLLAGKAQNRWFDKSISLLI 365
            |....||...|: .|:.|.|.|.||..|.....:|..:.|   .|.||.||..:||||||::|::
Zfish   399 FFIRGKNKQSLD-AVEKAAFFVTLDDSEQRYEPDNPIQSLDSYGKSLLHGKCYDRWFDKSLNLIV 462

  Fly   366 SADGTTAINFEHSWGDGVAVLRYFNE-LYKDTLKQPFVSTETVHTPAEGDFSNVRP-------IN 422
            ..:||..:|.||||.|...|...:.: |..|.::..:  ||..|..     .|..|       :.
Zfish   463 FKNGTMGLNAEHSWADAPIVGHLWEQVLSSDPVRLGY--TEEGHCK-----GNPHPNMPGPQRLQ 520

  Fly   423 FEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYRQAYSG 487
            ::|.:..::.:|.:.....::.|::||::..:....|...|:...|||..|||:.|||:.:....
Zfish   521 WDIPEECQTVISSSLKVANTLADDVDMHIFPFNDFGKGLIKKCKTSPDGFIQLALQLAHFRDKGK 585

  Fly   488 YVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRAMIDNCSKVHGQLTKE 552
            :..:||:..|..||.|||||:|.|||.|..|..|::.   .|.:..|...::...::.|..|.|.
Zfish   586 FCLTYEASMTRLFREGRTETVRSCTNETCAFVHAMMD---EKATREERLKLLKAATEKHQNLYKL 647

  Fly   553 AAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINNNIISTS------------------ 597
            |..|:|.|||||.|...::..|...|.|.|  :|.::      :|||                  
Zfish   648 AMTGKGIDRHLFCLYLVSKYLGEDSPFLKEVLSEPWR------LSTSQTPLQQMELFDLKKHPEY 706

  Fly   598 -TLGSDALLAGSFGPVVKNGFGIGYSI 623
             |.|      |.||||..:|:|:.|.|
Zfish   707 VTSG------GGFGPVADDGYGVSYII 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 174/611 (28%)
cpt1abXP_021329547.2 None

Return to query results.
Submit another query.