DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt1b

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001315121.1 Gene:cpt1b / 449677 ZFINID:ZDB-GENE-041010-9 Length:770 Species:Danio rerio


Alignment Length:662 Identity:188/662 - (28%)
Similarity:299/662 - (45%) Gaps:83/662 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMEL--H 92
            |...:.|.|| ||.|||.||:|.::::.||:||:.:|||...:..|.:.....|::....:|  |
Zfish   156 LLSGRRPLLYSFQGSLPHLPVPSIDDTIRRYLESVRPLLDDEQYKQMETVANDFKKDPAPKLQKH 220

  Fly    93 AKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSL 156
            .||||..|    |:|:|..|.: :||..|.|:.:|.|...:......|.| :|..||.|::.:.|
Zfish   221 LKLKSWWA----TNYVSDWWEEYIYLRGRDPIMVNSNFYTMDLLYVIPTY-RQAARAGNVVHAML 280

  Fly   157 RFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSR 221
            ::.|.|:...|.|                              ..|....|:...||.|:|.|:|
Zfish   281 QYRRKLERGELTP------------------------------LRALGIVPMCSFQYERMFNTTR 315

  Fly   222 IPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAASVPL 286
            ||.|..|.:....|.||::|..||.::.|.:.....:: .||.:..:.:.:|...::.:...:.|
Zfish   316 IPGIETDFVQHLKDRKHLVVYHRGRLFKVWLYYGGRHL-WPSELELQFQRILDDKSEPQPGELKL 379

  Fly   287 GVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNEN--QQEPLLKHLLA 349
            ..||:|.|..||:.|..:.....|...|| .::.|.|.:.||.|..|...||  ..:...|.||.
Zfish   380 PSLTAGNRVPWARARLKYFGEGVNRASLE-AIETAAFFLTLDDEAHGYDPENIRSLDLYAKSLLH 443

  Fly   350 GKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTETVHT--PAE 412
            ||..:||||||.:|::..:|...:|.||||.|...:    ..:::..|     :|:..|.  .||
Zfish   444 GKCYDRWFDKSFNLIVYKNGKMGVNTEHSWADSPII----GHMWEYVL-----ATDCFHLGYTAE 499

  Fly   413 GDF-----SNVRP---INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSP 469
            |..     ..:.|   :.::|..|.:..:..:|.....|.|::|.:...:....|...|:...||
Zfish   500 GHCKGDVNKTLAPPTRLQWDIPKACQEIIEGSYRIAKGIADDVDFHGCLFNEFGKGLIKKCRTSP 564

  Fly   470 DSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCE--AILQPERSKPSA 532
            |:.|||:.|||..:....:..:|||..|..||.|||||:|.||      ||  |.::......:.
Zfish   565 DAFIQLALQLAQYRDKGEFCLTYESSMTRMFREGRTETVRSCT------CESTAFVRAMEDDTTT 623

  Fly   533 GELR-AMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINN--- 591
            .|.| |:....::.|..:.:.|..|.|.|||||.|...::..||..|.|.:  :|.::...:   
Zfish   624 NEQRLALFKQAAEKHQNMYRLAMTGAGIDRHLFCLYIVSKVMGIDSPFLKQVLSEPWRLSTSQTP 688

  Fly   592 ----NIISTSTLGSDALLAGSFGPVVKNGFGIGYSI--QNDFAGAIVTTYKN-QADGKVFIDSLE 649
                |:|.|..........|.||||..:|:|:.|.|  :|.....|.:.:.: :.|...|..::.
Zfish   689 QQQLNLIDTQKFPKYVSAGGGFGPVADDGYGVSYIIVGENLITFHISSKFSSPETDSFRFGQNIR 753

  Fly   650 SAFDKICAVIQQ 661
            .|...|.|:..|
Zfish   754 QAMQDIRALFNQ 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 178/639 (28%)
cpt1bNP_001315121.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 171..760 CDD:279140 178/640 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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