DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and crata

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001005587.1 Gene:crata / 449545 ZFINID:ZDB-GENE-040927-17 Length:631 Species:Danio rerio


Alignment Length:647 Identity:171/647 - (26%)
Similarity:293/647 - (45%) Gaps:69/647 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQ--GIGMELHAKLKSHDAE 101
            |..|..||:||:|.|:.:|.|:|.|..|::.|.|...|::.:|.|::  |:|..|...|:|..| 
Zfish    34 LTHQEGLPKLPVPPLKQTCDRYLAALDPIVDPEELNHTRKLLEDFQKPGGVGERLQKGLESRAA- 97

  Fly   102 NKHTSYISQPWFD-MYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQAD 165
             |..:::|..|.. .||..|.|:.::.:|.:|:......:.|.|:..|..||...|.|...:..:
Zfish    98 -KLNNWLSDWWLQTAYLDYRMPVVVHSSPGVVLPRMEFSDRQGQMRYAAKLIAGVLDFKSMIDNE 161

  Fly   166 LLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDEL 230
            .|..|  ::..|                             ||.|.||.::..:.|||...:|.:
Zfish   162 TLPLE--YLGGK-----------------------------PLCMHQYYQVLSSCRIPGTKRDTV 195

  Fly   231 V----QSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAV--LKLDADREAASVPLGVL 289
            |    ....:.||.|:.....:.::|.:|.|...:...|..:|..:  ..|..::|    |:|:|
Zfish   196 VNYAMDKRPSTHITVVHNFQFFVLDVYNSDGTPLTVDQIYIQLEKIWNSSLQTNKE----PIGIL 256

  Fly   290 TSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPLLKHLLAG---- 350
            ||..|:.|.|...:.:.:..|.:.: |.:..::|.||||.......::..:......:|.|    
Zfish   257 TSNHRNSWGKAYNNLIKDKTNKESV-RAIQKSIFTVCLDAPMPRASDDMYRTRAGVQMLHGGGSR 320

  Fly   351 -KAQNRWFDKSISLLISADGTTAINFEHSWGDG---VAVLRYFNELYKDTLKQPFVSTETVHTPA 411
             .:.||||||::..:|..|||..:.:||:..:|   |::|.:..|..|        .:|.|.||.
Zfish   321 WNSGNRWFDKTLQFIIGEDGTCGLIYEHAPAEGPPIVSILDHVVEYMK--------KSEMVRTPM 377

  Fly   412 EGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQLS 476
            . .....:.:.|.|....|..:.:|......:|.:||:.|..:.|..|...|...:|||:.||::
Zfish   378 V-PLRMPQKLRFNITPEIKKDIEDAKQNMNIMVHDLDLRVNVFTHFGKNFPKSQKMSPDAFIQMA 441

  Fly   477 FQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRAMIDN 541
            .||||.:.|.....:|||.|...||.|||:|:|..::.:..|.:|:..|.:...   |..|::|.
Zfish   442 LQLAYYRIYKRCCPTYESASLRMFRLGRTDTIRSASSDSASFVKAMDDPVKHNT---EKVALLDK 503

  Fly   542 CSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTLGSDALLA 606
            ..|.|...|..|..||..||||..|:..|.::...:|:::...:|....:..:|||.:.:.....
Zfish   504 AVKAHRSYTDMAIRGQAIDRHLLGLKLQAIEDLAALPEIFMDTSYAVALHYNLSTSQVPAKTDCV 568

  Fly   607 GSFGPVVKNGFGIGYSIQNDFAGAIVTTYKNQADGKV--FIDSLESAFDKICAVIQQSSSSK 666
            ..|||||.:|:|:.|:..:......|:.:.:..|...  ....||.|...:..:::|:..:|
Zfish   569 MCFGPVVPDGYGVCYNPMDTHINFAVSAFNSCQDTNAVRLAQGLEDALLDMRTLLEQTPRAK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 167/628 (27%)
crataNP_001005587.1 Carn_acyltransf 40..620 CDD:279140 167/629 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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