DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and CROT

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster


Alignment Length:672 Identity:176/672 - (26%)
Similarity:292/672 - (43%) Gaps:112/672 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMELHAKLKSHDAEN 102
            |..|..:||.||:|.|.::..|:....:|..:..|.||.::|:::|:.|:|.:||.:||...|..
  Fly    16 TFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGM 80

  Fly   103 KHTSYISQPWFDM-YLADRAPLPLNYNPLLVMKSDAR-------PEYQQQVVRATNLIISSLRFW 159
            :  :::...|.|. |...|.|| |.|. |:||.|...       |||..:.:  ...|..||.||
  Fly    81 R--NWLGTWWEDYGYHLIRMPL-LPYQ-LMVMPSQLEMVGVPETPEYMLKSL--ARHIHHSLEFW 139

  Fly   160 RSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPR 224
            ...:...::|  ...|..|                 ..|:|..:|.|          |.|.|:|.
  Fly   140 DLTRKSSIKP--LSSNGGK-----------------IKYSSALYKHF----------FSTCRVPG 175

  Fly   225 IGKDELV-------QSPDAKHILVMRRGHMYAVN-VLDSSGYIESPSVI--LGRLRAVLKLDADR 279
            ..:|.:.       :.....|:|:..:|..:..: |.:....:.:|.::  |.|:|::|..:   
  Fly   176 EEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFDCVHEDDTILSAPEILVALQRVRSILDYE--- 237

  Fly   280 EAASVPLG----VLTSGQRDEWAKTRQHF----VSNTKNADLLEREVDAALFCVCLDGEEDGVFN 336
                 |||    .|:..:|..||:.|...    |:| |...||   |::|...:|...:....:.
  Fly   238 -----PLGDCVPTLSHDERSTWARNRNRLREISVAN-KETLLL---VESACMEICWYEQSPKDYE 293

  Fly   337 ENQQEPLLKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPF 401
            |:.|..|.     |...:||.|:|.|::...:|......|||..||...:.|...:....|:.| 
  Fly   294 ESCQLGLY-----GDLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLSFLEVP- 352

  Fly   402 VSTETVHTPAE-GDFSNVRPINFEIDDATKSAVSEAYNKNASIVDN--LDMNV--LKYPHINKPT 461
               |.....|| |:...|:.::|::||..|:.:......    :|:  :|:.|  ..:....|..
  Fly   353 ---EPDWAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKD----IDDRGIDVTVTFTAFDDYGKDF 410

  Fly   462 CKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPE 526
            .|.:.|.|||.:|:..|.||.|.:.....:||:.....:.:|||||:|.||:|..:|..|     
  Fly   411 MKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRA----- 470

  Fly   527 RSKPSAGEL------RAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEA 585
            .|....|::      |..:|.    |.....||..|.|.|||||.|...|.:..:.||..|:...
  Fly   471 SSNKQVGDMSLARAFRRAVDE----HKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDDPM 531

  Fly   586 YKRI---NNNIISTSTLGSDALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKN--QADGKVFI 645
            |.:.   .|.::|:||||..|.: |...|:|.:|:|:.|||.::......|.|::  :...:.|.
  Fly   532 YTKSGGGGNFVLSSSTLGFTANV-GFVAPMVFDGYGVFYSITSEAVFINTTAYRDSLKTSARKFN 595

  Fly   646 DSLESAFDKICAVIQQSSSSKK 667
            |..:.:|.:|..:::|.:...|
  Fly   596 DIFKDSFRRISVLLEQLAKESK 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 171/651 (26%)
CROTNP_001334704.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469038
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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