DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and Crat

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001004085.1 Gene:Crat / 311849 RGDID:1303031 Length:626 Species:Rattus norvegicus


Alignment Length:641 Identity:164/641 - (25%)
Similarity:294/641 - (45%) Gaps:63/641 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQ--GIGMELHAKLKSHDAENKH 104
            |.:|||||:|.|:.|...:|:|.:|::|..|.|.|:|.|::|:.  |:|..|...|:..  ..|.
  Rat    32 QDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERR--AKKM 94

  Fly   105 TSYISQPWF-DMYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQADLLE 168
            .:::|:.|. ..||..|.|:.:..:|.:::......:.|.|:..|..||...|.|...:..:.|.
  Rat    95 ENWLSEWWLKTAYLQFRQPVVIYSSPGVLLPKQDFMDLQGQLRFAAKLIEGVLDFKSMIDNETLP 159

  Fly   169 PEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDELVQS 233
            .|.                               ....||.|:||.::..:.|:|.:.:|.:|..
  Rat   160 VEF-------------------------------LGGQPLCMNQYYQILSSCRVPGLKQDSVVNF 193

  Fly   234 PDAK----HILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAV--LKLDADREAASVPLGVLTSG 292
            ..:|    ||.|:.....:.::|..|.|...:...|..:|..:  ..|.:::|    |:|:|||.
  Rat   194 LKSKKPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKE----PVGILTSN 254

  Fly   293 QRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPLLKHLLAG-----KA 352
            .|:.|||.....:.:..|.:.: ..:..::|.||||.:...|.::..:..:...:|.|     .:
  Rat   255 HRNSWAKAYSSLIKDKVNRESV-NSIQKSIFTVCLDKQVPRVSDDVYRSHVAGQMLHGGGSKFNS 318

  Fly   353 QNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTETVHTPAEGDFSN 417
            .||||||::..:::.||:..:.:||:..:|..::...:.:.:.|.|...|.:..|..|..     
  Rat   319 GNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMP----- 378

  Fly   418 VRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYR 482
             :.:.|.|....|:.:.:|....:.::.:||:.:|.:.|..|...|...||||:.||::.||||.
  Rat   379 -KKLRFNITPEIKNDIEKAKQNISIMIQDLDIMMLVFHHFGKDFPKSQKLSPDAFIQIALQLAYY 442

  Fly   483 QAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRAMIDNCSKVHG 547
            :.|.....:|||.|...|..|||:|:|..:..:..|.:.:..|:..:....||   :....:.|.
  Rat   443 RIYGQACATYESASLRMFHLGRTDTIRSASTDSLAFVKGMDDPKVPEQQRVEL---LRKAVQAHR 504

  Fly   548 QLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTLGSDALLAGSFGPV 612
            ..|..|..|:.|||||..|:..|.::.:.:||::...:|....:..:|||.:.:......|||||
  Rat   505 AYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMSFGPV 569

  Fly   613 VKNGFGIGYSIQNDFAGAIVTTYKNQADGKV--FIDSLESAFDKICAVIQQSSSSK 666
            |.:|:||.|:.........|:.|.:.|:...  ....||.|...:..::|....:|
  Rat   570 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 161/625 (26%)
CratNP_001004085.1 Carn_acyltransf 35..615 CDD:279140 161/626 (26%)
Coenzyme A binding. /evidence=ECO:0000250|UniProtKB:P47934 423..430 3/6 (50%)
Microbody targeting signal. /evidence=ECO:0000255 624..626 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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