DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and Cpt1c

DIOPT Version :10

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_006229128.1 Gene:Cpt1c / 308579 RGDID:1305384 Length:802 Species:Rattus norvegicus


Alignment Length:709 Identity:193/709 - (27%)
Similarity:298/709 - (42%) Gaps:126/709 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WI----STNSSRTTT-------THGQHYQYLQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEAT 64
            |:    .|.||.|.|       ..|:|         |.|: |||:|||.|:|..:.:.|::||:.
  Rat   135 WLLEPHGTMSSPTKTWLALVRIFSGRH---------PRLFSFQRALPRQPVPGAQETVRKYLESM 190

  Fly    65 KPLLSPAEQAQTQQTVEQF--RQGIGMELHAKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLN 126
            :|:|..............|  .|...::|:.:|||..|.|    |:|..|.: :||..|..|   
  Rat   191 RPVLRDDAFDSVVALANDFLRLQAPRLQLYLQLKSWCASN----YVSDWWEEFVYLRSRGSL--- 248

  Fly   127 YNPLLVMKSD---ARPEYQQQVVRATNLIISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWM 188
            .|....|..|   ..|. ..|..||.|.:.:.|.:...|....:.|.:. |..:           
  Rat   249 VNSTYYMMQDFLYVTPT-PLQAARAGNAVHTLLLYRHLLNRQEIPPTLL-MGMR----------- 300

  Fly   189 KVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVL 253
                              ||..:||.|:|.|:|||.:.||.|....|::|:.|..:|..:.|...
  Rat   301 ------------------PLCSAQYERMFNTTRIPGVEKDYLCHLQDSQHVAVFHQGRFFRVGTH 347

  Fly   254 DSSGYIESPSVILGRLRAVLKLDADREAASVP----LGVLTSGQRDEWAKTRQHFVSNTKNADLL 314
            .|:|.: ||..:..:.:.:|    |..:.:.|    |..||:..|..||:.|:..  .|..|..|
  Rat   348 SSNGLL-SPRALEQQFQYIL----DDPSPACPLEEHLAALTAAPRSMWAQVRESV--KTHAATAL 405

  Fly   315 EREVDAALFCVCLDGEEDGVFNENQQEPLLKH---LLAGKAQNRWFDKSISLLISADGTTAINFE 376
            | .|:.|.|.|.||.|..|:..||....|..:   ||.|:..:||||||.:|::.::|...::.|
  Rat   406 E-TVEGAAFFVSLDSEPAGLTRENPAASLDTYAHTLLTGQGHDRWFDKSFTLIVFSNGKLGLSVE 469

  Fly   377 HSWGD-GVAVLRYFNELYKDTLKQPFVSTETV--------HTPAEGDFSNVRP--INFEIDDATK 430
            |||.| .||     ..|::.||     :||..        |.....|.:..:|  :.:::....:
  Rat   470 HSWADCPVA-----GHLWEFTL-----ATECFQLGYATDGHCKGHPDPALPKPQRLQWDLPKQIQ 524

  Fly   431 SAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESC 495
            .::|.|.....::..|:|.:|..:.|..|...|...:|.||.|||..|||:.:....:..:|||.
  Rat   525 PSISLALRGAKTLSGNIDCHVFPFFHFGKSFIKGCHVSSDSFIQLVLQLAHFRDRGQFCLTYESA 589

  Fly   496 STSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGEL-RAMIDNCSKVHGQLTKEAAMGQGF 559
            .|..|..|||||:|.||.....|..|:...||:......| |..:|.    |..|.|.|..|||.
  Rat   590 MTRLFLEGRTETVRSCTREACQFVRAMENKERTDQQCLALFREAVDK----HQALLKAAMSGQGI 650

  Fly   560 DRHLFALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTLGSD-------------ALLAGSFGP 611
            |||||||...::...:..|.|.:.::.:.    ::|||.:...             ....|.|||
  Rat   651 DRHLFALYIMSRLLHMQSPFLTQVQSQQW----LLSTSQIPVQQTHLFDVHNYPDYVSSGGGFGP 711

  Fly   612 VVKNGFGIGYSIQNDFAGAIVTTYK---NQADGKVFIDSLESAFDKICAVIQQSSSSKK 667
            ...:|:|:.|....:.|.:...:.|   .:.|.......:|.|...:.::.|.....|:
  Rat   712 AHDHGYGVSYIFMGENAISFHISSKQSSTETDSHRLGQHIEDALLDVASLFQAGQQFKR 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 173/642 (27%)
Cpt1cXP_006229128.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 173/642 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.