DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and Chat

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001164064.1 Gene:Chat / 290567 RGDID:1304627 Length:644 Species:Rattus norvegicus


Alignment Length:658 Identity:176/658 - (26%)
Similarity:310/658 - (47%) Gaps:73/658 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KLP---TLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQ--GIGMELHAK 94
            |:|   :.:.:..||:||:|.|:.:...:|:..:.|:...:..::|..|::|..  |:|..|..|
  Rat    10 KMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEK 74

  Fly    95 LKSHDAENKHTSYISQPWF-DMYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRF 158
            |.  :.:.|..:::|:.|. ||||.:|..||:|.:|.::.   ||..:|.     ||   ..|||
  Rat    75 LL--ERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIF---ARQHFQD-----TN---DQLRF 126

  Fly   159 WRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIP 223
            ...|.:.:|               ||:..:. :......:|.......||.|.||.|||.:.|:|
  Rat   127 AACLISGVL---------------SYKTLLD-SHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLP 175

  Fly   224 RIGKDELVQS-----PDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAAS 283
            ...:|.||..     |:.:|::|......:.::|:.:...: |...:..:||.::|:.::.:...
  Rat   176 GHTQDTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRL-SEGDLFTQLRKIVKMASNEDERL 239

  Fly   284 VPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPLLKHLL 348
            .|:|:|||..|.||||.|...:.::.|.|.|:. ::..:..|||||...|..::..:...|.|  
  Rat   240 PPIGLLTSDGRSEWAKARTVLLKDSTNRDSLDM-IERCICLVCLDGPGTGELSDTHRALQLLH-- 301

  Fly   349 AG----KAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKD--TLKQPFVSTETV 407
            .|    ...|||:|||:..::..|||..:..|||..||:.:::....|.|.  |..:..|..::|
  Rat   302 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSV 366

  Fly   408 -HTPAEGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDS 471
             ..||.      |.:.::....|:..::.:..|...||.|||..|.|:.:..|...|:...|||.
  Rat   367 SELPAP------RRLRWKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDG 425

  Fly   472 IIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELR 536
            .||::.||||.:.|...|.:|||.|...|:.||.:.:|..|.....|.:|:...:.:.|::.:|:
  Rat   426 FIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQ 490

  Fly   537 AMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTLGS 601
             ::....:...:.|..|..|...|.||.|||..|:......|:::..|.|...|..::|||.:.:
  Rat   491 -LLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPT 554

  Fly   602 DALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKN----------QADGKVFIDSLESAFDKIC 656
            ...:...:||||.||:|..|:.|.:.....::::.:          :|.|...:|..:     :|
  Rat   555 TMEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRD-----LC 614

  Fly   657 AVIQQSSS 664
            :..|.:.|
  Rat   615 SSRQPADS 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 171/634 (27%)
ChatNP_001164064.1 Carn_acyltransf 23..611 CDD:395612 171/627 (27%)
Coenzyme A binding. /evidence=ECO:0000305 412..424 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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