DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and Cpt1b

DIOPT Version :10

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_006242242.1 Gene:Cpt1b / 25756 RGDID:2397 Length:775 Species:Rattus norvegicus


Alignment Length:633 Identity:174/633 - (27%)
Similarity:295/633 - (46%) Gaps:98/633 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIG--MELH 92
            |..|:.|.|| ||.|||:||:|.:..:..|:|::.:|||......:.:...::|:..|.  ::.:
  Rat   158 LLSSRRPMLYSFQTSLPKLPVPSVPATIHRYLDSVRPLLDDEAYFRMESLAKEFQDKIAPRLQKY 222

  Fly    93 AKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYN----PLLVMKSDARPEYQQQVVRATNLI 152
            ..|||..|    |:|:|..|.: :||..|:|:.:|.|    ..:::|:.:     ||..|..|.:
  Rat   223 LVLKSWWA----TNYVSDWWEEYVYLRGRSPIMVNSNYYAMDFVLIKNTS-----QQAARLGNTV 278

  Fly   153 ISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLF 217
            .:.:.:.|.|..:.::|.:                              |....|:...|..|:|
  Rat   279 HAMIMYRRKLDREEIKPVM------------------------------ALGMVPMCSYQMERMF 313

  Fly   218 GTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAA 282
            .|:|||....|.|....:::|:.|..:|..:.|.:.:.|..:: |..:..:.:.:|...:..:..
  Rat   314 NTTRIPGKETDLLQHLSESRHVAVYHKGRFFKVWLYEGSCLLK-PRDLEMQFQRILDDTSPPQPG 377

  Fly   283 SVPLGVLTSGQRDEWAKTRQHFVSNTKN---ADLLEREVDAALFCVCLDGEEDGVFNENQQEPLL 344
            ...|..||:|.|.|||:.||.|.|:.||   .|.:||    |.|.|.|| |:...:|.:.:..|.
  Rat   378 EEKLAALTAGGRVEWAEARQKFFSSGKNKMSLDTIER----AAFFVALD-EDSHCYNPDDEASLS 437

  Fly   345 ---KHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNE--LYKDTLKQPFVST 404
               |.||.|...|||||||.:|:...:|...:|.||||.| ..::.:..|  |..||....:  |
  Rat   438 LYGKSLLHGNCYNRWFDKSFTLISCKNGQLGLNTEHSWAD-APIIGHLWEFVLATDTFHLGY--T 499

  Fly   405 ETVHTPAEGDFSNVRP--INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGL 467
            ||.|...|.:.....|  :.::|.:..::|:..:|....::.|::::...::....|...|:...
  Rat   500 ETGHCVGEPNTKLPPPQRMQWDIPEQCQTAIENSYQVAKALADDVELYCFQFLPFGKGLIKKCRT 564

  Fly   468 SPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSA 532
            |||:.:|::.|||:.:....:..:||:..|..||.|||||:|.||:.:..|..|::.....|.  
  Rat   565 SPDAFVQIALQLAHFRDKGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVRAMMTGSHKKQ-- 627

  Fly   533 GELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINNNIIS 595
             :|:.:....|:.|..:.:.|..|.|.|||||.|...::..|:..|.|.|  :|.:.      :|
  Rat   628 -DLQDLFRKASEKHQNMYRLAMTGAGIDRHLFCLYIVSKYLGVRSPFLDEVLSEPWS------LS 685

  Fly   596 TST-----------------LGSDALLAGSFGPVVKNGFGIGYSIQND 626
            ||.                 ||:    .|.||||..:|:|:.|.|..:
  Rat   686 TSQIPQFQICMFDPKQYPNHLGA----GGGFGPVADHGYGVSYMIAGE 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 164/615 (27%)
Cpt1bXP_006242242.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 176..759 CDD:459926 164/615 (27%)
Blue background indicates that the domain is not in the aligned region.

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