DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cha-1

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001023603.1 Gene:cha-1 / 24105307 WormBaseID:WBGene00000481 Length:627 Species:Caenorhabditis elegans


Alignment Length:659 Identity:155/659 - (23%)
Similarity:281/659 - (42%) Gaps:103/659 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YFQRSLPRLPIPLLENSCRRFLE--ATKPLLSPAEQAQTQQTVEQF-RQGIGMELHAKLKSHDAE 101
            :::.:||:.|:|.||.:..|:||  |...:...|..|.|.....:| ||...::....    :..
 Worm    15 WYETALPKPPVPSLEATLDRYLEYAAVVAVGQKASLATTHDAAHKFVRQATPLQEQLL----EIA 75

  Fly   102 NKHTSYISQPWF-DMYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQAD 165
            .|..::.::.|. :||:..|.|.|:|.||..:... .:.|.::..::.|.|:...|..:::|   
 Worm    76 EKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPK-VKFETKEDHIKYTALLTRGLLEYKNL--- 136

  Fly   166 LLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDEL 230
                                    :..|......|...:...:.|.||:|:....|.|.:|:|..
 Worm   137 ------------------------IDTKQVCREKSTGAQKLQMCMEQYDRVLSCYREPGVGEDTQ 177

  Fly   231 VQSPDA----KHILVMRRGHMYAVNVLDSSGYIESPSV--ILGRLRAVLKLDADREAASVPLGVL 289
            ::....    :|:|||.|...:.::...:...:....|  .|.::..:.|::.:..|   .:|..
 Worm   178 IRKQKTNDGNEHVLVMCRNQTFLLHSRINGALVSYADVEYQLAQIEEISKINQNNTA---NIGAS 239

  Fly   290 TSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLD-------GEEDGV-FNENQQE----- 341
            ..|.||..|...|..::..:|:...| .|.:|||.||||       |:.|.: .:|.::|     
 Worm   240 GVGPRDNAALFWQDMLTVEQNSKSYE-WVKSALFVVCLDMEDPIDYGKNDTMSISEKEKEFVARG 303

  Fly   342 --PLLKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAV-------LRYFNELYKDTL 397
              .|..|..:....|||:|.:|.|::|:.|...:..|||..:|:.:       :||..:.:|..:
 Worm   304 YSTLTGHGSSKFGLNRWYDATIQLVVSSSGVNGLCIEHSTAEGIVIINMAETAIRYAQKYFKSKM 368

  Fly   398 KQPFVSTETVHTPAEGDFSNVRP--INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKP 460
                         ...|..||.|  :.:...:.:::.:.:.......:.:.|::.||.:....|.
 Worm   369 -------------VWNDVRNVHPKSLTWHFSENSRNILKKQAEVFDELANELELEVLIFNEFGKD 420

  Fly   461 TCKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQP 525
            :.|.:.:|||..|||..|||:.:.:...|.:|||.|...|..||.:.:|..|....::..|:...
 Worm   421 SIKNWRVSPDGFIQLIMQLAHYKTHGHLVSTYESASVRRFGAGRVDNIRANTQEALEWVTAMASK 485

  Fly   526 ERSKPSAGEL--RAMIDNCSKVHGQLTKEAAMGQGFDRHLFAL----RHTAQKEGIPIPDLYETE 584
            :.||....||  :|::...     ::|.|...|.|.|.||.||    |...:..|..||.|:...
 Worm   486 KESKERKLELFKKAVLKQV-----KVTLENISGYGVDNHLCALFCLAREREETTGEDIPSLFLDP 545

  Fly   585 AYKRINNNIISTSTLGS-----DALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKN--QADGK 642
            .:..:....:|||.:.:     |..|  ::|.||::|:|..|:||.|......|.:::  :.|.:
 Worm   546 LWSEVMRFPLSTSQVTTSLDIPDCYL--TYGAVVRDGYGCPYNIQPDRVIFAPTAFRSDPRTDLQ 608

  Fly   643 VFIDSLESA 651
            .|..||..|
 Worm   609 HFKKSLAGA 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 155/654 (24%)
cha-1NP_001023603.1 Carn_acyltransf 20..622 CDD:279140 155/654 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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