DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt-3

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_497498.2 Gene:cpt-3 / 190055 WormBaseID:WBGene00021703 Length:722 Species:Caenorhabditis elegans


Alignment Length:658 Identity:175/658 - (26%)
Similarity:297/658 - (45%) Gaps:86/658 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QYLQCSKLPTLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQF--RQGIGMEL 91
            |...|.:|        |..||:|.||::..|:.::.|.::|..|......|..||  .:|..::.
 Worm   120 QLSSCDRL--------LSNLPLPRLEDTVTRYTDSMKFVISEEEHNNLIATSTQFLSHEGRTLQR 176

  Fly    92 HAKLKSHDAENKHTSYISQPWF---DMYLADRAPLPL---NYNPLLVMKSDARPEYQQQVVRATN 150
            .|.|.....:|    |::  ||   .:|.|.|.|||:   ....:|..:.|....|  ||.|.  
 Worm   177 FAWLLHLITDN----YVT--WFWEKYIYYAGRYPLPIISSTCQCVLYGEDDLTQVY--QVARL-- 231

  Fly   151 LIISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNR 215
            |.|.:|.               :::..:.|      ::.|.....:|             ..|..
 Worm   232 LYIETLA---------------NLSVDRQD------YLAVGDGLMST-------------RHYRN 262

  Fly   216 LFGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADRE 280
            ::..||:|....|....:|.::|.||:.:|..|.|:..|..|.:.|.:. |.::.:.|....|:.
 Worm   263 IYNGSRVPGAEIDNFQWNPPSRHALVVHKGTWYKVDTCDEDGRLYSVNE-LAKIVSELTTRQDKS 326

  Fly   281 AASV-PLGVLTSGQRDEWAKT-RQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPL 343
            ...: .:..||:.:|.||:|. |:.|::|..|..||| .::.:.:.:.:|..:.||...::....
 Worm   327 TGFLCKISSLTADRRTEWSKNRRKFFLNNAHNKKLLE-VIETSQYVISMDTAKWGVETSDKMSVY 390

  Fly   344 LKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVA---VLRYFNELYKDTLKQPFVSTE 405
            :|.:|||...||||||:::..|.|:|......|||..||..   |...|..|.|..||.| ...|
 Worm   391 MKDMLAGDGTNRWFDKTMNYAICANGRGGATGEHSPADGAEMDHVCENFLNLDKQILKSP-SKEE 454

  Fly   406 TVHTPAEGDFSN----VRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYG 466
            .:......:.||    ...:.||:::..:..|...|..:...|.:|.::.:.:....|...|:.|
 Worm   455 QLEIAKLDEPSNYLKLAEKLEFEVEEGLEEEVERCYEAHTKAVADLHVHSIIFLDFGKGRLKKCG 519

  Fly   467 LSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPS 531
            :|||..:|::.||||.:....:..:||:.|...:.:.||||:||.|:|:.....|:|....||.:
 Worm   520 ISPDGFVQMAIQLAYFEDQGKFTQTYETGSIRFYANSRTETVRPVTSASCKLVCAMLDETSSKQT 584

  Fly   532 AGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGI--PIPDLYETEAYKRINNNI- 593
            .   |.::....:||....||..:|.|||||||.|...|:..|.  |..|.:.::.:....:|| 
 Worm   585 R---RQLLKEACEVHVNNCKEVMLGNGFDRHLFVLCVIAKGLGYNSPFLDFFSSQKWLLSTSNIP 646

  Fly   594 -----ISTSTLGSDALLAGSFGPVVKNGFGIGYSIQNDFAGAI-VTTYKNQ--ADGKVFIDSLES 650
                 |:..|..::.:|.||||.|.::|:||.|....:.|..: :|:|.:.  .|.:...:.|:|
 Worm   647 NMTNSIAEDTSVNNIMLGGSFGAVAQDGYGICYRFGGNHAILVHITSYHSSELTDSERIGNRLKS 711

  Fly   651 AFDKICAV 658
            ||.::..:
 Worm   712 AFHRLAGL 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 172/637 (27%)
cpt-3NP_497498.2 Carn_acyltransf 128..716 CDD:376382 172/637 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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