DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt-6

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_504648.1 Gene:cpt-6 / 179035 WormBaseID:WBGene00020911 Length:746 Species:Caenorhabditis elegans


Alignment Length:660 Identity:173/660 - (26%)
Similarity:289/660 - (43%) Gaps:111/660 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMEL--HAKLKSHDAENKHT 105
            |.||.||:|.|:::...:|::.|.:||..|.....:...:|.:..|.:|  :..:.|...:|   
 Worm   146 RLLPSLPVPALKDTISEYLDSMKHILSEQEYEIVAKQAHEFLENEGKKLQRYTWIYSLFTDN--- 207

  Fly   106 SYISQPWFD-MYLADRAPLPLNYNPLLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQADLLEP 169
             |::..|.. .||..|.||.:|                           ||:     ...|||..
 Worm   208 -YVTSFWQKYAYLHGRYPLMIN---------------------------SSV-----AHCDLLRD 239

  Fly   170 EVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRL-------------FGTSR 221
            :    .|.::..::...|::|            .....:|..||..|             :..:|
 Worm   240 K----EATRAHRAARVTWIEV------------MSHLAIDRQQYKALGDGLVCTRHYKNMYAVTR 288

  Fly   222 IPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAASVPL 286
            .|....|:|:.....|||:|:.||..|.::|:|....|.:...:......::..|...|.....:
 Worm   289 EPGKKIDQLILHGIQKHIVVVLRGKYYKIHVVDDKNNIYTVEQLTKIFHEMISRDEKEEGVIGKI 353

  Fly   287 GVLTSGQRDEWAKTRQ-HFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPL---LKHL 347
            ..||...||.|.:.|| :|:.|.|||.:| :|::.|:|...||..:|..::|.:.|.|   |.:.
 Worm   354 AALTHDTRDSWHRNRQKYFLGNVKNAQIL-KEIECAVFFFTLDENDDYGYDEKKPEVLSNFLANC 417

  Fly   348 LAGKAQNRWFDKSISLLISAD----GTTAINFEHSWGDGVA---VLRYFNELYKDTLKQPFV-ST 404
            |:|...|||.|||::.:.|.:    |||    |||..||..   ::..|..:..:.||...: ..
 Worm   418 LSGDGTNRWVDKSLNYICSKNARCGGTT----EHSIADGAEFDHIMENFVYVDLEVLKYKSIEEQ 478

  Fly   405 ETVHTPAEGDFSNVR---PINFEI-DDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQY 465
            |.:....|.|..:::   |:|||: |....|.::..|:.:....::||:..|.:....|...|:.
 Worm   479 EKMAVIEENDKKSLKLATPLNFEVPDQEMLSEITRCYDAHQIAKNDLDLYALAFRDFGKGRIKKC 543

  Fly   466 GLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKP 530
            |:|||:.||::.|||..:....:|.:||..|...|.:.||||:|...:.:.:|.||:|....:|.
 Worm   544 GVSPDAFIQMAIQLANYRDQGKFVLTYEPASARFFANSRTETLRTVNDHSCEFVEAMLNANETKE 608

  Fly   531 SAGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGI--PIPDLYETEAYKRINNNI 593
            :.   .|::....:.|....|:..:|||.|||||.|...:|..||  |..|.|..:.:|...:::
 Worm   609 AK---IALLKKACETHVLRNKKCMVGQGVDRHLFVLYILSQGTGIQSPFLDNYINQKWKLSTSHV 670

  Fly   594 ISTS------TLGSDALLAGSFGPVVKNGFGIGYSIQNDFAG-----AIVTTYKNQA--DGKVFI 645
            .:.:      |...:..|...||.|..:|:||.|.    |.|     |.:|:|.:.|  |...|.
 Worm   671 PNVTNQCDEDTDSDNTWLGACFGAVAADGYGICYR----FGGNHGIFANITSYHSAANTDSTKFA 731

  Fly   646 DSLESAFDKI 655
            ..|..:|.::
 Worm   732 KLLSESFHEL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 172/656 (26%)
cpt-6NP_504648.1 Carn_acyltransf 148..741 CDD:376382 172/656 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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