DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt-4

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_504348.1 Gene:cpt-4 / 178889 WormBaseID:WBGene00019644 Length:748 Species:Caenorhabditis elegans


Alignment Length:668 Identity:167/668 - (25%)
Similarity:292/668 - (43%) Gaps:90/668 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QYLQCSKLPTLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQF--RQGIGMEL 91
            |...|.:|        ||.||:|.|:::..|::::.|.|:|..:..|..:...:|  .:|..::.
 Worm   133 QLSSCDRL--------LPNLPLPALQDTVDRYVDSMKHLMSEEDYDQLLEMSRKFVSNEGRSIQR 189

  Fly    92 HAKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNP---LLVMKSDARPEYQQQVVRATNL- 151
            :|.......:|    |::..|.. :|:|.|.||.:|.:.   .:..:||....|  ||.|...: 
 Worm   190 YAWFLHKFTDN----YVTSLWEQYIYMAGRYPLLINSSVAQCTMYGESDLIQAY--QVARLIYIE 248

  Fly   152 IISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRL 216
            .|::|...|                        :::|.:.....:|             ..|..:
 Worm   249 TIANLALDR------------------------QKYMAIGEGLMST-------------RHYRNI 276

  Fly   217 FGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREA 281
            :...|||....|....:..|||::::.....|.|::.||:|.:.:...:...:..|:..|...:.
 Worm   277 YNGCRIPGKQYDSFQWNKPAKHVILVHDCTWYKVDICDSNGQLYTVDQLAKIVAEVMGRDDKSKG 341

  Fly   282 ASVPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEED-GVFNENQQEPLLK 345
            ....:..||:.:|.||...||.|....|:...|.::::.|.|.:.:||:.: ||....|....:|
 Worm   342 YLRNIASLTTDRRTEWCSNRQKFFLENKHNQKLLQQIETAQFVMSVDGDLNWGVETTEQLSKYMK 406

  Fly   346 HLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTET---- 406
            .:|||...|||.||:::..:.|.|......|||..|| |.|.:..|...:..||..||..|    
 Worm   407 DMLAGSGSNRWVDKTMNYAVDASGRAGATGEHSPCDG-AELDHLCENVLNVDKQVLVSPSTEEQL 470

  Fly   407 ----VHTPAEGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGL 467
                :....:......:.::|:..|..::.|:..:.::....|:|.|:.:.:....|...|:.|:
 Worm   471 EIIKMTFTEKNSLRLAQKLDFQEVDGMETEVNRCFEQHHKASDDLHMHSIAFTDFGKGRVKKCGI 535

  Fly   468 SPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSA 532
            |||..:|::.|||.......:|.:||..|...:.:.||||:||.|:.:..|.:|:|..|.::.  
 Worm   536 SPDGFLQMAIQLANYYDQGKFVLTYEPGSVRFYANSRTETLRPVTDYSCKFVQAMLSDESTQK-- 598

  Fly   533 GELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDL--YETEAYKRINNNIIS 595
             |.|.::....:.|.:..||...|:|.|||||.|...|:..|...|.|  |..:.:....:||.:
 Worm   599 -ERRDLLKKACEAHVENCKEVMTGKGVDRHLFVLCVLAKGLGYSSPFLEEYANQKWLLSTSNIPN 662

  Fly   596 -TSTLGSD-----ALLAGSFGPVVKNGFGIGYSIQNDFAG--AI---VTTYKNQ--ADGKVFIDS 647
             |:::..|     .:|..|||.|.::|:||.|.    |||  ||   :|:|.:.  .|...|...
 Worm   663 MTNSVDEDISEDNIMLGASFGAVAQDGYGICYR----FAGNRAIMVHITSYHSSPATDSDRFGQH 723

  Fly   648 LESAFDKICAVIQQSSSS 665
            |..|...:..:.....|:
 Worm   724 LREAIHTLADLFDDEPSN 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 163/640 (25%)
cpt-4NP_504348.1 Carn_acyltransf 150..731 CDD:376382 157/631 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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